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The map label for this gene is dppB-3 [H]

Identifier: 15899343

GI number: 15899343

Start: 2382794

End: 2383825

Strand: Reverse

Name: dppB-3 [H]

Synonym: SSO2618

Alternate gene names: 15899343

Gene position: 2383825-2382794 (Counterclockwise)

Preceding gene: 15899344

Following gene: 15899342

Centisome position: 79.67

GC content: 37.69

Gene sequence:

>1032_bases
ATGTCCATAAATATAGTTTTCTTTATCATAAGAAGAATCATTAATGCTTTCATTACCCTAATATTACTAATTATATTGGT
TTTTATTATGATACATATAATAGCACCAAATCCCTTAGCCTTAGCAAGGCTATACACTGGGCCACATGCGACCTACACAG
AGTTAGAACAGGTAGCCAAACAATATGGACTTGACCAACCCCTTTACATCCAAATAATTAACTACATAATTAATGTACTA
CATGGAAATTTCGGTATAGATCCAACATATAAGGTACCGGTGATTACGCTGATTGGAAAATATTTACCAAGAACCCTAGA
GTTGGTAATACCAGCAACAATACTTTCCGTAGTTATTGGTTTGTTTACTGGCGCCATAGCTGCATCAAACAGAAATAAAC
CGCTGGATTATCTGGTCCGTGGCGTTTACTTAGTTACTTGGGCATCTCCGCCATTTTTAATTGCTGTTATATTACAGCTA
GTTATAGCATACTATCTCAGATTATTACCCCCTACCGGTACTGTCAACCCAGTTCTTACTCCGCCAAAGTCTATAACACC
TTTTCCTTTGCTTAACGCGATGTTAGCAGGGGATTGGCCTTATTTTTCTAGTTTAGTCCACCATATGGTCTTGCCTGTTA
TAGCGATTGCGTTGGTCAGTTTTGGAATAGTGACTAGAATAGCCAGAGCTTCAATGCTGGATTATATGGAATCTGACTTC
GCTAAACTTAGTCTCATGAAGGGGCTTAGTAGAAGAAGAGTTGTATATGGTGTGGTTTTAAGAAATGCATCGATACCATT
AGTAACATTGATTGCTTTGCTTTTCGGATACTCAGTAGCTGGGGCAGTCGTGATTGAGGATATATTCCAATATCATGGAA
TGGGGTATTTCATTACTCAAGCAATAGAAAGTCTAGATTACACATCAATTTTGGGGACAACAATAATTGTTGGAATTGCA
ATAATAATAGCGAATCTTATAGCAGATATACTTTACGGGGTTCTAGATCCAAGGGTGAGGATAGTTGAGTGA

Upstream 100 bases:

>100_bases
CAGGGTTCTAAAGTCATCTTTATTTTTCTTTTTCTTTCCTCGTTTACTTTGTGAGAATAAATATATTAGTACCCTCAAAC
TTTATTTAAATGGACATGGT

Downstream 100 bases:

>100_bases
AAGTTCCGGAATTAGATTTATGTTAAAGGCGCTAATTAGAGATAAGGCTGGATTATTGGGATTAATTATAGTAAGCCTTT
TCCTAATATGGTCTCTCATA

Product: peptide ABC transporter permease

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSINIVFFIIRRIINAFITLILLIILVFIMIHIIAPNPLALARLYTGPHATYTELEQVAKQYGLDQPLYIQIINYIINVL
HGNFGIDPTYKVPVITLIGKYLPRTLELVIPATILSVVIGLFTGAIAASNRNKPLDYLVRGVYLVTWASPPFLIAVILQL
VIAYYLRLLPPTGTVNPVLTPPKSITPFPLLNAMLAGDWPYFSSLVHHMVLPVIAIALVSFGIVTRIARASMLDYMESDF
AKLSLMKGLSRRRVVYGVVLRNASIPLVTLIALLFGYSVAGAVVIEDIFQYHGMGYFITQAIESLDYTSILGTTIIVGIA
IIIANLIADILYGVLDPRVRIVE

Sequences:

>Translated_343_residues
MSINIVFFIIRRIINAFITLILLIILVFIMIHIIAPNPLALARLYTGPHATYTELEQVAKQYGLDQPLYIQIINYIINVL
HGNFGIDPTYKVPVITLIGKYLPRTLELVIPATILSVVIGLFTGAIAASNRNKPLDYLVRGVYLVTWASPPFLIAVILQL
VIAYYLRLLPPTGTVNPVLTPPKSITPFPLLNAMLAGDWPYFSSLVHHMVLPVIAIALVSFGIVTRIARASMLDYMESDF
AKLSLMKGLSRRRVVYGVVLRNASIPLVTLIALLFGYSVAGAVVIEDIFQYHGMGYFITQAIESLDYTSILGTTIIVGIA
IIIANLIADILYGVLDPRVRIVE
>Mature_342_residues
SINIVFFIIRRIINAFITLILLIILVFIMIHIIAPNPLALARLYTGPHATYTELEQVAKQYGLDQPLYIQIINYIINVLH
GNFGIDPTYKVPVITLIGKYLPRTLELVIPATILSVVIGLFTGAIAASNRNKPLDYLVRGVYLVTWASPPFLIAVILQLV
IAYYLRLLPPTGTVNPVLTPPKSITPFPLLNAMLAGDWPYFSSLVHHMVLPVIAIALVSFGIVTRIARASMLDYMESDFA
KLSLMKGLSRRRVVYGVVLRNASIPLVTLIALLFGYSVAGAVVIEDIFQYHGMGYFITQAIESLDYTSILGTTIIVGIAI
IIANLIADILYGVLDPRVRIVE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=32.4483775811209, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1787761, Length=316, Percent_Identity=33.8607594936709, Blast_Score=171, Evalue=5e-44,
Organism=Escherichia coli, GI1787053, Length=333, Percent_Identity=30.6306306306306, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1789888, Length=340, Percent_Identity=30, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1787497, Length=335, Percent_Identity=29.2537313432836, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1787550, Length=274, Percent_Identity=29.5620437956204, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788504, Length=292, Percent_Identity=23.972602739726, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37916; Mature: 37785

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINIVFFIIRRIINAFITLILLIILVFIMIHIIAPNPLALARLYTGPHATYTELEQVAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH
QYGLDQPLYIQIINYIINVLHGNFGIDPTYKVPVITLIGKYLPRTLELVIPATILSVVIG
HHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFTGAIAASNRNKPLDYLVRGVYLVTWASPPFLIAVILQLVIAYYLRLLPPTGTVNPVLT
HHHHHHHCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PPKSITPFPLLNAMLAGDWPYFSSLVHHMVLPVIAIALVSFGIVTRIARASMLDYMESDF
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLSLMKGLSRRRVVYGVVLRNASIPLVTLIALLFGYSVAGAVVIEDIFQYHGMGYFITQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AIESLDYTSILGTTIIVGIAIIIANLIADILYGVLDPRVRIVE
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure 
SINIVFFIIRRIINAFITLILLIILVFIMIHIIAPNPLALARLYTGPHATYTELEQVAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH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HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]