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The map label for this gene is dppC-3 [H]

Identifier: 15899342

GI number: 15899342

Start: 2381905

End: 2382801

Strand: Reverse

Name: dppC-3 [H]

Synonym: SSO2617

Alternate gene names: 15899342

Gene position: 2382801-2381905 (Counterclockwise)

Preceding gene: 15899343

Following gene: 15899341

Centisome position: 79.63

GC content: 37.12

Gene sequence:

>897_bases
TTGAGTGAAAGTTCCGGAATTAGATTTATGTTAAAGGCGCTAATTAGAGATAAGGCTGGATTATTGGGATTAATTATAGT
AAGCCTTTTCCTAATATGGTCTCTCATACAAGGAATATTAGAGATATTGTCAAGTTATCTTAGAAAACAATATTTAGGTT
ATATACTCCTTCCACATAATCCCTTCCAATATAATTTACAGTTGGCTTTTCATCCTCCTTCATCTACTTTCCTTTTAGGT
ACTAATGCAGAAGGGGAAGATATTCTTTCAAGAATTTTATACGCATTACCTAGAGATGCATTCGTAGCAATAGTGGTAGT
GTTTTCAGCTATAATCATAGGAGGAATATTAGGAATACTTGCGGGTTATCTAGGCGGTATTGTAGATGAAATCCTAATGA
GAGTTACTGACGCCTTTCTATCCTTGCCCGCATTAATATTAGTTATCGCAATAACTGTACCATTAAAGGCTACCTTCTTC
GCCACTATACTAGGCTTAGCGGTAGTGTGGTGGCCAACCTATGCTAGATTCTATAGGGCACAAACGTTAAGGATAAAGAA
CATGGACTACATCTCTGCCGCAAAATTAAGTAACGTATCTAGAATATCACTGTTCTACAGATATATTTTTCTAAACGCCA
TAGACCCTGTATTAGCCTATGCAGCATTGGATTTTGGTAACGTAATACTAACTTATTCGACCTTAGCGTTTCTAGGAATA
GGAATAACGCCTCCAATCCCAGAATTAGGAGAAATGGCAGCAAATGGTGTTACTGGTTTACCGCAATACTGGTGGTGGGC
CTTATTTCCAGGGTTGACTATTCTAATTATTGTCGTAGGTTTTGTACTATTAGGTGACAGATTACAAGATGTAGTAGCTG
GAAGAATAGTCTATTAG

Upstream 100 bases:

>100_bases
TCAATTTTGGGGACAACAATAATTGTTGGAATTGCAATAATAATAGCGAATCTTATAGCAGATATACTTTACGGGGTTCT
AGATCCAAGGGTGAGGATAG

Downstream 100 bases:

>100_bases
GTGAATAATATGGTAGTGCTTCAGATTAGAAATTTGAACGTTTACTATAATACACTAATTAGCTGGGTTAAAGTATTAAG
TGATGTAAACCTAGATGTAG

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSESSGIRFMLKALIRDKAGLLGLIIVSLFLIWSLIQGILEILSSYLRKQYLGYILLPHNPFQYNLQLAFHPPSSTFLLG
TNAEGEDILSRILYALPRDAFVAIVVVFSAIIIGGILGILAGYLGGIVDEILMRVTDAFLSLPALILVIAITVPLKATFF
ATILGLAVVWWPTYARFYRAQTLRIKNMDYISAAKLSNVSRISLFYRYIFLNAIDPVLAYAALDFGNVILTYSTLAFLGI
GITPPIPELGEMAANGVTGLPQYWWWALFPGLTILIIVVGFVLLGDRLQDVVAGRIVY

Sequences:

>Translated_298_residues
MSESSGIRFMLKALIRDKAGLLGLIIVSLFLIWSLIQGILEILSSYLRKQYLGYILLPHNPFQYNLQLAFHPPSSTFLLG
TNAEGEDILSRILYALPRDAFVAIVVVFSAIIIGGILGILAGYLGGIVDEILMRVTDAFLSLPALILVIAITVPLKATFF
ATILGLAVVWWPTYARFYRAQTLRIKNMDYISAAKLSNVSRISLFYRYIFLNAIDPVLAYAALDFGNVILTYSTLAFLGI
GITPPIPELGEMAANGVTGLPQYWWWALFPGLTILIIVVGFVLLGDRLQDVVAGRIVY
>Mature_297_residues
SESSGIRFMLKALIRDKAGLLGLIIVSLFLIWSLIQGILEILSSYLRKQYLGYILLPHNPFQYNLQLAFHPPSSTFLLGT
NAEGEDILSRILYALPRDAFVAIVVVFSAIIIGGILGILAGYLGGIVDEILMRVTDAFLSLPALILVIAITVPLKATFFA
TILGLAVVWWPTYARFYRAQTLRIKNMDYISAAKLSNVSRISLFYRYIFLNAIDPVLAYAALDFGNVILTYSTLAFLGIG
ITPPIPELGEMAANGVTGLPQYWWWALFPGLTILIIVVGFVLLGDRLQDVVAGRIVY

Specific function: Part of the ABC transporter complex ddpABCDF, which is probably involved in D,D-dipeptide transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=237, Percent_Identity=38.3966244725738, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1789964, Length=245, Percent_Identity=36.734693877551, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1787054, Length=273, Percent_Identity=29.6703296703297, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789889, Length=238, Percent_Identity=30.2521008403361, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788505, Length=221, Percent_Identity=29.8642533936652, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787498, Length=213, Percent_Identity=30.5164319248826, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1787549, Length=277, Percent_Identity=28.5198555956679, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32894; Mature: 32763

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESSGIRFMLKALIRDKAGLLGLIIVSLFLIWSLIQGILEILSSYLRKQYLGYILLPHN
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
PFQYNLQLAFHPPSSTFLLGTNAEGEDILSRILYALPRDAFVAIVVVFSAIIIGGILGIL
CCEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AGYLGGIVDEILMRVTDAFLSLPALILVIAITVPLKATFFATILGLAVVWWPTYARFYRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLRIKNMDYISAAKLSNVSRISLFYRYIFLNAIDPVLAYAALDFGNVILTYSTLAFLGI
HHHEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GITPPIPELGEMAANGVTGLPQYWWWALFPGLTILIIVVGFVLLGDRLQDVVAGRIVY
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SESSGIRFMLKALIRDKAGLLGLIIVSLFLIWSLIQGILEILSSYLRKQYLGYILLPHN
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
PFQYNLQLAFHPPSSTFLLGTNAEGEDILSRILYALPRDAFVAIVVVFSAIIIGGILGIL
CCEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AGYLGGIVDEILMRVTDAFLSLPALILVIAITVPLKATFFATILGLAVVWWPTYARFYRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLRIKNMDYISAAKLSNVSRISLFYRYIFLNAIDPVLAYAALDFGNVILTYSTLAFLGI
HHHEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GITPPIPELGEMAANGVTGLPQYWWWALFPGLTILIIVVGFVLLGDRLQDVVAGRIVY
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]