Click here to switch to the map view.

The map label for this gene is acrR [C]

Identifier: 15899244

GI number: 15899244

Start: 2275200

End: 2275796

Strand: Direct

Name: acrR [C]

Synonym: SSO2506

Alternate gene names: 15899244

Gene position: 2275200-2275796 (Clockwise)

Preceding gene: 15899235

Following gene: 15899246

Centisome position: 76.04

GC content: 33.17

Gene sequence:

>597_bases
GTGGTCCAAATGTATAGGTACCCAAAAACTGAAAAGGGGAAGGAGTCATTAAATAAAATCATAAATGCATCGCTAGACTT
AATTTCAGAAAAGGGCTTTTTGAATACTAGTATAAGTGATATAACCAATAAGGCTGGTGTTGCTTACGGTTTGTTCTATT
TCTATTTCAAGAGTAAACATGACATATTAGATGAGTTAATTAGAAAATTTAACACCGATATGAGGTATTATTTAAAGGTA
AATACGATGGGGATTCGAAATAGAATAGAAATGGAAAAGGAAGGTTTAGCCAAATTTTTGGAATGGATGAGCCAGAATAA
GAAATACTATAAGGTATTCGTAGAAGCTCAAGTGCATAGGCCAGAAATGTATATATGGCATTTCACTAAATTGGCAGAGA
GATATAAGATTGGACTAAAAGAGGCTATGGATAGGGGAGAAATAGTAAAAGTAGATCCAGAATTACTAGCTTACGTATTA
ATAGGAATTGGTGAAATGATAGGTAGAAGATATATCCTATGGACGAATCAAGGGTTAACCAAAAAACAATATAATGACTT
GGCCATTCTTATAGAAAATATGCTGAGACCTAAGTAG

Upstream 100 bases:

>100_bases
TTTATACATTTAAAAAGTATTATTGTAATGTCAATTTCCTTTAGAGTAAGGTTTATATAAGATGAAAATAAATTATAAAT
TGACTCAGTAATCAAAAAAG

Downstream 100 bases:

>100_bases
TCTAAACAAGGAATTTCGTATTTATTTTATTTGAGACGTTAGCCATAACCACTGAAGCAGTAGTATATCTTGCCAGATCG
AAGAGACTACCTTTCTTAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Tetr Family

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MVQMYRYPKTEKGKESLNKIINASLDLISEKGFLNTSISDITNKAGVAYGLFYFYFKSKHDILDELIRKFNTDMRYYLKV
NTMGIRNRIEMEKEGLAKFLEWMSQNKKYYKVFVEAQVHRPEMYIWHFTKLAERYKIGLKEAMDRGEIVKVDPELLAYVL
IGIGEMIGRRYILWTNQGLTKKQYNDLAILIENMLRPK

Sequences:

>Translated_198_residues
MVQMYRYPKTEKGKESLNKIINASLDLISEKGFLNTSISDITNKAGVAYGLFYFYFKSKHDILDELIRKFNTDMRYYLKV
NTMGIRNRIEMEKEGLAKFLEWMSQNKKYYKVFVEAQVHRPEMYIWHFTKLAERYKIGLKEAMDRGEIVKVDPELLAYVL
IGIGEMIGRRYILWTNQGLTKKQYNDLAILIENMLRPK
>Mature_198_residues
MVQMYRYPKTEKGKESLNKIINASLDLISEKGFLNTSISDITNKAGVAYGLFYFYFKSKHDILDELIRKFNTDMRYYLKV
NTMGIRNRIEMEKEGLAKFLEWMSQNKKYYKVFVEAQVHRPEMYIWHFTKLAERYKIGLKEAMDRGEIVKVDPELLAYVL
IGIGEMIGRRYILWTNQGLTKKQYNDLAILIENMLRPK

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23506; Mature: 23506

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQMYRYPKTEKGKESLNKIINASLDLISEKGFLNTSISDITNKAGVAYGLFYFYFKSKH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
DILDELIRKFNTDMRYYLKVNTMGIRNRIEMEKEGLAKFLEWMSQNKKYYKVFVEAQVHR
HHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECC
PEMYIWHFTKLAERYKIGLKEAMDRGEIVKVDPELLAYVLIGIGEMIGRRYILWTNQGLT
CEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCEEEEEECCCCC
KKQYNDLAILIENMLRPK
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVQMYRYPKTEKGKESLNKIINASLDLISEKGFLNTSISDITNKAGVAYGLFYFYFKSKH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
DILDELIRKFNTDMRYYLKVNTMGIRNRIEMEKEGLAKFLEWMSQNKKYYKVFVEAQVHR
HHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECC
PEMYIWHFTKLAERYKIGLKEAMDRGEIVKVDPELLAYVLIGIGEMIGRRYILWTNQGLT
CEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCEEEEEECCCCC
KKQYNDLAILIENMLRPK
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA