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The map label for this gene is acd-like2 [H]

Identifier: 15899237

GI number: 15899237

Start: 2266770

End: 2267669

Strand: Reverse

Name: acd-like2 [H]

Synonym: SSO2497

Alternate gene names: 15899237

Gene position: 2267669-2266770 (Counterclockwise)

Preceding gene: 15899238

Following gene: 15899236

Centisome position: 75.78

GC content: 35.11

Gene sequence:

>900_bases
ATGCTCCTAGATCTTAACTTCGAAATTAGCGAGGATCTTAAACTGATTTTAAGCAGTCTAAATGAATTACTGGAATCAAG
GTGGTCCACAAAAAAGTTAAGGGCAGTAATGGAGGGAAACAAGGATTATATTGAGGAAATATGGAAGGAAATAATTAAGC
TTGATATCTTACCTTACCTTTCCACACTATCATTAAGAGATAACGTGATAATAAATGAAGTTATTGGTAGAAAATTACTG
CCTGGAATTGTGGTAAGTAGTATAGTAGCATCTAGGGGTATTAAGAACAAGGACATTTTGAATAGAGTATACGCCGGTGA
AATTAGAATAGCAATATCTGATTCAAACTTAGTGCCCTCGGCTGATGAGGCTGATTATATAATAATAGGAAATAGACTGA
TTAAGAGAAGCAACTGTACAATTCGCACTTTCAATTCTCTTGATAGCTCCATGAAAATTAGTAAAGTAGACAACATTGGA
AACCATGAAGATATAGAAGTTAATAACGCTGAAATCGCACTTTCATTAGCCTCTCAGATGGTGGGAAGTGGTGAAGAAGT
AGTTAGTATGTCAATTAAGTATAGTAAAGAGAGAGTCGCTTTTGGAAAACCTATAGGTTCGTATCAGGCAATAAAGCATA
GAGTGGTTAATGACGCAATTGATGTGGAATTAGCTAGATCTTTAATATTGGAAGCAGCAGAAAATATAAAGTACGCATGG
ATAGCTAAGGATTTAGCTAATAAGAAGATACCTAAGGCTATATTAAGTGGTATCCAAGTCCATGGCGGGATAGGATTTAC
AGATGATCTTGATATTCACCTCCATTTAAGGAGAGCGCTTACATTAAGTAAGTTATACAATAGTAAAGTGAATATCTCTG
AGTTCCTGCAACCTATATAA

Upstream 100 bases:

>100_bases
CTCTTGAATACTAGGATTGATGCAATAAATAGAGCCAGGCGGATGAAATTGGAAATGTTATTACCAAAGGATTTGGATGT
AATTGAATCATGGTGATTAA

Downstream 100 bases:

>100_bases
TCTATCAAATAAAATAATATAGTGGGTTAGATGATAAGATGTTAGAGGATGTATATCTGGTAGATTATGCGAGAACGGCA
TTTACGAGGTTTTCACGCAA

Product: Acyl-CoA dehydrogenase related protein (acd-like2)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MLLDLNFEISEDLKLILSSLNELLESRWSTKKLRAVMEGNKDYIEEIWKEIIKLDILPYLSTLSLRDNVIINEVIGRKLL
PGIVVSSIVASRGIKNKDILNRVYAGEIRIAISDSNLVPSADEADYIIIGNRLIKRSNCTIRTFNSLDSSMKISKVDNIG
NHEDIEVNNAEIALSLASQMVGSGEEVVSMSIKYSKERVAFGKPIGSYQAIKHRVVNDAIDVELARSLILEAAENIKYAW
IAKDLANKKIPKAILSGIQVHGGIGFTDDLDIHLHLRRALTLSKLYNSKVNISEFLQPI

Sequences:

>Translated_299_residues
MLLDLNFEISEDLKLILSSLNELLESRWSTKKLRAVMEGNKDYIEEIWKEIIKLDILPYLSTLSLRDNVIINEVIGRKLL
PGIVVSSIVASRGIKNKDILNRVYAGEIRIAISDSNLVPSADEADYIIIGNRLIKRSNCTIRTFNSLDSSMKISKVDNIG
NHEDIEVNNAEIALSLASQMVGSGEEVVSMSIKYSKERVAFGKPIGSYQAIKHRVVNDAIDVELARSLILEAAENIKYAW
IAKDLANKKIPKAILSGIQVHGGIGFTDDLDIHLHLRRALTLSKLYNSKVNISEFLQPI
>Mature_299_residues
MLLDLNFEISEDLKLILSSLNELLESRWSTKKLRAVMEGNKDYIEEIWKEIIKLDILPYLSTLSLRDNVIINEVIGRKLL
PGIVVSSIVASRGIKNKDILNRVYAGEIRIAISDSNLVPSADEADYIIIGNRLIKRSNCTIRTFNSLDSSMKISKVDNIG
NHEDIEVNNAEIALSLASQMVGSGEEVVSMSIKYSKERVAFGKPIGSYQAIKHRVVNDAIDVELARSLILEAAENIKYAW
IAKDLANKKIPKAILSGIQVHGGIGFTDDLDIHLHLRRALTLSKLYNSKVNISEFLQPI

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 33381; Mature: 33381

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS00482 DIHYDROOROTASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLDLNFEISEDLKLILSSLNELLESRWSTKKLRAVMEGNKDYIEEIWKEIIKLDILPYL
CEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
STLSLRDNVIINEVIGRKLLPGIVVSSIVASRGIKNKDILNRVYAGEIRIAISDSNLVPS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEECCCCCCC
ADEADYIIIGNRLIKRSNCTIRTFNSLDSSMKISKVDNIGNHEDIEVNNAEIALSLASQM
CCCCCEEEECCEEEECCCCEEEECCCCCCCCCHHHHCCCCCCCCEEECCHHHHHHHHHHH
VGSGEEVVSMSIKYSKERVAFGKPIGSYQAIKHRVVNDAIDVELARSLILEAAENIKYAW
HCCCHHHEEEHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
IAKDLANKKIPKAILSGIQVHGGIGFTDDLDIHLHLRRALTLSKLYNSKVNISEFLQPI
HHHHHHCCCHHHHHHCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHCCC
>Mature Secondary Structure
MLLDLNFEISEDLKLILSSLNELLESRWSTKKLRAVMEGNKDYIEEIWKEIIKLDILPYL
CEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
STLSLRDNVIINEVIGRKLLPGIVVSSIVASRGIKNKDILNRVYAGEIRIAISDSNLVPS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEECCCCCCC
ADEADYIIIGNRLIKRSNCTIRTFNSLDSSMKISKVDNIGNHEDIEVNNAEIALSLASQM
CCCCCEEEECCEEEECCCCEEEECCCCCCCCCHHHHCCCCCCCCEEECCHHHHHHHHHHH
VGSGEEVVSMSIKYSKERVAFGKPIGSYQAIKHRVVNDAIDVELARSLILEAAENIKYAW
HCCCHHHEEEHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
IAKDLANKKIPKAILSGIQVHGGIGFTDDLDIHLHLRRALTLSKLYNSKVNISEFLQPI
HHHHHHCCCHHHHHHCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]