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The map label for this gene is nrdB

Identifier: 15899238

GI number: 15899238

Start: 2267674

End: 2268600

Strand: Reverse

Name: nrdB

Synonym: SSO2498

Alternate gene names: NA

Gene position: 2268600-2267674 (Counterclockwise)

Preceding gene: 15899239

Following gene: 15899237

Centisome position: 75.82

GC content: 35.06

Gene sequence:

>927_bases
ATGGGTATGAGTTTTGAAGAATATAAGCATGAATACTTTAAGTCTATAAGATCTGGAGGCTTAAATTGGTCACTTTTCCC
AATGAAATTATATCAGCTTGGAAAGAAGCTTTTCTGGGATCCAGCCAATATAGATCTAAGTAAAGATGCAGAAGACTGGA
AAAAATTAAATGATTTAGAGAAAATGTTTATAATAAATGTTGGTTCAAAGTTCGCTGCGGGAGAAGAAGCCGTAGCATTA
GACCTCCATCCACTAATCGTGACACTAGTTAAGGAGGGAAGGGTAGAAGAGGTAATGTATTTAGAACAATTCGTTTATGA
GGAATCTAAACACGTTGAGGCATTTAGAAGATTTTTTGATATAGTCAATGTTATGGAAGATCTGAGCGCATATACAAAGG
ATCTTTCGCCTAATTATAAGAAGATATTCTATGAAGAATTACCAAAGGCTATGTGGAATTTATCTAGAGATCCTTCTCCT
GAAAATCAAGTTAGAGCCGTGGTAACTTACAATTTAATAGTTGAAGGAGTAGCAGCTGAAGGAGGTTACAATATTTTTAG
GCAGATAACAAATACAAGAAAGATCCTACCCGGCTTGGCTAAAATGGTAAACCTCATAGCTACTGATGAGTCTAGACATA
TAGCATTTGGAATATATTTAATTACAAGATTAGTAAAGGAATATGGAGAGGGAGTATATAAGGCTGCCATGGATCACATA
AATTATCTTGCACCTTATGCTATAGGAATATTCTCTGAACCTACAATGCCCCAAGTTGAAAGTCTACCTTTTAATCTAAC
TAATATAGAGCTAGTAGACTACGCTAAAAAGCTCTTGAATACTAGGATTGATGCAATAAATAGAGCCAGGCGGATGAAAT
TGGAAATGTTATTACCAAAGGATTTGGATGTAATTGAATCATGGTGA

Upstream 100 bases:

>100_bases
GAATAAAATAAGGGTCTTTTCGTTCTCTGGCTTAACTAAAACTTTATTTTATCGTATCTAAGGCAAAATTTAAATATAAA
CAAATCATTTATAGTTAATT

Downstream 100 bases:

>100_bases
TTAAATGCTCCTAGATCTTAACTTCGAAATTAGCGAGGATCTTAAACTGATTTTAAGCAGTCTAAATGAATTACTGGAAT
CAAGGTGGTCCACAAAAAAG

Product: ribonucleotide-diphosphate reductase subunit beta

Products: ribonucleoside diphosphate; thioredoxin

Alternate protein names: Ribonucleotide reductase R2 subunit homolog; Ribonucleotide reductase small subunit homolog [H]

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MGMSFEEYKHEYFKSIRSGGLNWSLFPMKLYQLGKKLFWDPANIDLSKDAEDWKKLNDLEKMFIINVGSKFAAGEEAVAL
DLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAFRRFFDIVNVMEDLSAYTKDLSPNYKKIFYEELPKAMWNLSRDPSP
ENQVRAVVTYNLIVEGVAAEGGYNIFRQITNTRKILPGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKAAMDHI
NYLAPYAIGIFSEPTMPQVESLPFNLTNIELVDYAKKLLNTRIDAINRARRMKLEMLLPKDLDVIESW

Sequences:

>Translated_308_residues
MGMSFEEYKHEYFKSIRSGGLNWSLFPMKLYQLGKKLFWDPANIDLSKDAEDWKKLNDLEKMFIINVGSKFAAGEEAVAL
DLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAFRRFFDIVNVMEDLSAYTKDLSPNYKKIFYEELPKAMWNLSRDPSP
ENQVRAVVTYNLIVEGVAAEGGYNIFRQITNTRKILPGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKAAMDHI
NYLAPYAIGIFSEPTMPQVESLPFNLTNIELVDYAKKLLNTRIDAINRARRMKLEMLLPKDLDVIESW
>Mature_307_residues
GMSFEEYKHEYFKSIRSGGLNWSLFPMKLYQLGKKLFWDPANIDLSKDAEDWKKLNDLEKMFIINVGSKFAAGEEAVALD
LHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAFRRFFDIVNVMEDLSAYTKDLSPNYKKIFYEELPKAMWNLSRDPSPE
NQVRAVVTYNLIVEGVAAEGGYNIFRQITNTRKILPGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKAAMDHIN
YLAPYAIGIFSEPTMPQVESLPFNLTNIELVDYAKKLLNTRIDAINRARRMKLEMLLPKDLDVIESW

Specific function: Probable oxidase [H]

COG id: COG0208

COG function: function code F; Ribonucleotide reductase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonucleoside diphosphate reductase small chain family. R2-like ligand binding oxidase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009078
- InterPro:   IPR012348
- InterPro:   IPR000358 [H]

Pfam domain/function: PF00268 Ribonuc_red_sm [H]

EC number: 1.17.4.1

Molecular weight: Translated: 35633; Mature: 35501

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMSFEEYKHEYFKSIRSGGLNWSLFPMKLYQLGKKLFWDPANIDLSKDAEDWKKLNDLE
CCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
KMFIINVGSKFAAGEEAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAFRRFFD
HEEEEECCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IVNVMEDLSAYTKDLSPNYKKIFYEELPKAMWNLSRDPSPENQVRAVVTYNLIVEGVAAE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEHHEEHHHHHHHHHCC
GGYNIFRQITNTRKILPGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKAAMDHI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
NYLAPYAIGIFSEPTMPQVESLPFNLTNIELVDYAKKLLNTRIDAINRARRMKLEMLLPK
HHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLDVIESW
CCHHHCCC
>Mature Secondary Structure 
GMSFEEYKHEYFKSIRSGGLNWSLFPMKLYQLGKKLFWDPANIDLSKDAEDWKKLNDLE
CCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
KMFIINVGSKFAAGEEAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAFRRFFD
HEEEEECCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IVNVMEDLSAYTKDLSPNYKKIFYEELPKAMWNLSRDPSPENQVRAVVTYNLIVEGVAAE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEHHEEHHHHHHHHHCC
GGYNIFRQITNTRKILPGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKAAMDHI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
NYLAPYAIGIFSEPTMPQVESLPFNLTNIELVDYAKKLLNTRIDAINRARRMKLEMLLPK
HHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLDVIESW
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2'-deoxyribonucleoside diphosphate; thioredoxin disulfide; H2O

Specific reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA