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The map label for this gene is arf

Identifier: 15898866

GI number: 15898866

Start: 1895792

End: 1896118

Strand: Direct

Name: arf

Synonym: SSO2080

Alternate gene names: NA

Gene position: 1895792-1896118 (Clockwise)

Preceding gene: 15898865

Following gene: 15898874

Centisome position: 63.36

GC content: 36.09

Gene sequence:

>327_bases
ATGCTAGTCAGAGTGTCTAGCTTATCAGACTTGGAAGAGAAGAAACCAAGAAAATTCTCCATCAACGGCATAGAAGTAGT
CATAGTTAGGGTTGGTGATAAAGTGTTTGCTATAGAAGCATATTGTCCTCATAAGGGAAGGAATCTGGAATATGGAGAGG
TAGAGGGATATAAAATAAGGTGCGATTTACACGGATATGAATATAGTCTTGAAAACGGTGAGTTGATATTTAATCCTTAT
GGTAAAACGTCAGGGTGGTACTTCTCACCTAACTTAAGGATTTACAAAGTGGAGATAAAGGGCAAAGATATTTTTATACA
AATTTAA

Upstream 100 bases:

>100_bases
CATTTCAGAAGAAGTTCACCAGGGAACGCTCCATATTCCAAGAAATAATAAAAGGTAACTGTATTTTTTCCTATTTCTAT
TTTTAATTGGTGATTATTCA

Downstream 100 bases:

>100_bases
ATTTCAAATTCTATTGATCTAGCGTCTTGCACAATTAAACTGCAATAGGTTTCCTTCATTTCTTGCCTACATTCACCTCT
ATTCTTGATCTCGGGTATTT

Product: Rieske-type ferredoxin (aRF)

Products: NA

Alternate protein names: 3-Phenylpropionate; Rieske-Type Ferredoxin; Rieske Protein; Rieske Domain-Containing Protein

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLVRVSSLSDLEEKKPRKFSINGIEVVIVRVGDKVFAIEAYCPHKGRNLEYGEVEGYKIRCDLHGYEYSLENGELIFNPY
GKTSGWYFSPNLRIYKVEIKGKDIFIQI

Sequences:

>Translated_108_residues
MLVRVSSLSDLEEKKPRKFSINGIEVVIVRVGDKVFAIEAYCPHKGRNLEYGEVEGYKIRCDLHGYEYSLENGELIFNPY
GKTSGWYFSPNLRIYKVEIKGKDIFIQI
>Mature_108_residues
MLVRVSSLSDLEEKKPRKFSINGIEVVIVRVGDKVFAIEAYCPHKGRNLEYGEVEGYKIRCDLHGYEYSLENGELIFNPY
GKTSGWYFSPNLRIYKVEIKGKDIFIQI

Specific function: Unknown

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12510; Mature: 12510

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRVSSLSDLEEKKPRKFSINGIEVVIVRVGDKVFAIEAYCPHKGRNLEYGEVEGYKIR
CEEEECCCCCHHHCCCCEEECCCEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCEEEE
CDLHGYEYSLENGELIFNPYGKTSGWYFSPNLRIYKVEIKGKDIFIQI
EEECCEEEEECCCCEEEECCCCCCCEEECCCCEEEEEEECCCEEEEEC
>Mature Secondary Structure
MLVRVSSLSDLEEKKPRKFSINGIEVVIVRVGDKVFAIEAYCPHKGRNLEYGEVEGYKIR
CEEEECCCCCHHHCCCCEEECCCEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCEEEE
CDLHGYEYSLENGELIFNPYGKTSGWYFSPNLRIYKVEIKGKDIFIQI
EEECCEEEEECCCCEEEECCCCCCCEEECCCCEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA