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The map label for this gene is 15898793

Identifier: 15898793

GI number: 15898793

Start: 1816948

End: 1817670

Strand: Direct

Name: 15898793

Synonym: SSO1998

Alternate gene names: NA

Gene position: 1816948-1817670 (Clockwise)

Preceding gene: 15898792

Following gene: 15898794

Centisome position: 60.72

GC content: 40.53

Gene sequence:

>723_bases
TTGATCTACTCTAAGGTTTTTTTAAAACTTCATTGGGGTTTTTCCGTAGTTAAGCCCTCAGCAGCTAAGGCAAAGTCAGG
GTTCTATTTACCACCTCCTACTACATTGATTGGAGCTTTATCCTACGGTAAATTTAGGGGGATTGATAATACTAATTTAG
GCAAGATTTACGGTAGTCCGGCGTATAATTTTAGGAACGTTATGGCTACTGCTAGATTAGAGTCTGAGGGAGCTTACACT
GAGGATATTGTTAGAAACGTTATATCTTATTTCCAACGTAAGGATAGGAGGGATAATCCGAGATATATTTACGGAGTGAT
CCCTACTGGTAAAGTGTATATGCCTAACGGTACGTTAGTTGTCGTCTACGTAACTGATTCCATGAGCAAGGAAGAGCTGG
AAAAACTCAGCTGGAGTATAACTAGGATAGGAGGTAAGGAGTGTTTGGTAAGTGTGGAGAACGTTGAAATTGGGGAGGCT
AAGAAGGTTTCAGGTAGGATGAAAACTAGATATTATTTTAGAGATACTGTAAAGGTAGTAGGTAAGAAGGAGTTTTTGGA
ATATGTTACTTTTTGGGAAGAGAACGGGTATATATGGGGAAAGGAGGGAGGACCAATAAGGTACATCTTGCCGGTGGCTA
CCTATCCCTTAGCTAGTAAGGAGGTTGAAGTTGAGGCTAAGGAAGCATATGAGGTTGGTGGAGAATATGTTGTCTTTAGC
TGA

Upstream 100 bases:

>100_bases
TAACAATGAGGGTATAGAAGTGGGTGAAGGAGCTACAGTACTGTCAAGTGTTGAGGATTTGGTAGCTAAATTAAAGGAAA
AGTAGTGAGGCAGGGGAGAT

Downstream 100 bases:

>100_bases
TTTCTATAACGATTTCATAACTCGTCATGGCTTTGAGGAAAGGAAGGGTATTGAAGAGACTTTACTAAATTTGGAAAACG
GGCATAGCGTTATACTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Family

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MIYSKVFLKLHWGFSVVKPSAAKAKSGFYLPPPTTLIGALSYGKFRGIDNTNLGKIYGSPAYNFRNVMATARLESEGAYT
EDIVRNVISYFQRKDRRDNPRYIYGVIPTGKVYMPNGTLVVVYVTDSMSKEELEKLSWSITRIGGKECLVSVENVEIGEA
KKVSGRMKTRYYFRDTVKVVGKKEFLEYVTFWEENGYIWGKEGGPIRYILPVATYPLASKEVEVEAKEAYEVGGEYVVFS

Sequences:

>Translated_240_residues
MIYSKVFLKLHWGFSVVKPSAAKAKSGFYLPPPTTLIGALSYGKFRGIDNTNLGKIYGSPAYNFRNVMATARLESEGAYT
EDIVRNVISYFQRKDRRDNPRYIYGVIPTGKVYMPNGTLVVVYVTDSMSKEELEKLSWSITRIGGKECLVSVENVEIGEA
KKVSGRMKTRYYFRDTVKVVGKKEFLEYVTFWEENGYIWGKEGGPIRYILPVATYPLASKEVEVEAKEAYEVGGEYVVFS
>Mature_240_residues
MIYSKVFLKLHWGFSVVKPSAAKAKSGFYLPPPTTLIGALSYGKFRGIDNTNLGKIYGSPAYNFRNVMATARLESEGAYT
EDIVRNVISYFQRKDRRDNPRYIYGVIPTGKVYMPNGTLVVVYVTDSMSKEELEKLSWSITRIGGKECLVSVENVEIGEA
KKVSGRMKTRYYFRDTVKVVGKKEFLEYVTFWEENGYIWGKEGGPIRYILPVATYPLASKEVEVEAKEAYEVGGEYVVFS

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27212; Mature: 27212

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSKVFLKLHWGFSVVKPSAAKAKSGFYLPPPTTLIGALSYGKFRGIDNTNLGKIYGSP
CCCCEEEEEEECCEEEECCCCHHCCCCEECCCCHHHHHHHCCCEECCCCCCCCCEEECCC
AYNFRNVMATARLESEGAYTEDIVRNVISYFQRKDRRDNPRYIYGVIPTGKVYMPNGTLV
CCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCEE
VVYVTDSMSKEELEKLSWSITRIGGKECLVSVENVEIGEAKKVSGRMKTRYYFRDTVKVV
EEEEECCCCHHHHHHHHHEEEEECCHHEEEEECCCCCCCCHHCCCCCEEEEEEHHHHHHH
GKKEFLEYVTFWEENGYIWGKEGGPIRYILPVATYPLASKEVEVEAKEAYEVGGEYVVFS
HHHHHHHHHEEECCCCEEECCCCCCEEEEEEEECCCCCCCEEEEEHHHHHHCCCCEEEEC
>Mature Secondary Structure
MIYSKVFLKLHWGFSVVKPSAAKAKSGFYLPPPTTLIGALSYGKFRGIDNTNLGKIYGSP
CCCCEEEEEEECCEEEECCCCHHCCCCEECCCCHHHHHHHCCCEECCCCCCCCCEEECCC
AYNFRNVMATARLESEGAYTEDIVRNVISYFQRKDRRDNPRYIYGVIPTGKVYMPNGTLV
CCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCEE
VVYVTDSMSKEELEKLSWSITRIGGKECLVSVENVEIGEAKKVSGRMKTRYYFRDTVKVV
EEEEECCCCHHHHHHHHHEEEEECCHHEEEEECCCCCCCCHHCCCCCEEEEEEHHHHHHH
GKKEFLEYVTFWEENGYIWGKEGGPIRYILPVATYPLASKEVEVEAKEAYEVGGEYVVFS
HHHHHHHHHEEECCCCEEECCCCCCEEEEEEEECCCCCCCEEEEEHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA