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The map label for this gene is ttuB [H]

Identifier: 15898333

GI number: 15898333

Start: 1360281

End: 1361546

Strand: Direct

Name: ttuB [H]

Synonym: SSO1505

Alternate gene names: 15898333

Gene position: 1360281-1361546 (Clockwise)

Preceding gene: 15898331

Following gene: 15898334

Centisome position: 45.46

GC content: 35.86

Gene sequence:

>1266_bases
ATGAAGTCCCTTGTTGAGAGTTCCAGACATAAAAGATATCTTAGGATCCTTCCAATTCTCTTTTTCCTGTATATTGTAAA
CTTCCTAGACAGAGTAAATATTTCATATGCAATAGATGCTCATATGTTCCAATATTTAGGTGTCCCAACTAGACAAGTTG
GTATAATTGCTTCTCTCGCATCATCCCTATTCTTTATAGGGTATTTCATTCCTCAAATTTTCTCTAACTTGGGTATCAAT
AGGTATGGTGTTAGAAAAATATTTCTAGCAGCATTTACGGTCTGGGGAATAATTACCATATTGACAGGATTTGTTTCCTC
GGTATCACAAGTTTACGTATTAAGATTTTTACTTGGAATAGCTGAAGGACCTTTCTTTGCTGGCGTTATGTTTTATCTTA
GTCTGTGGTTTTTAAAGCCGGAGAGAGCTACAGCTAATAGTTTTTTCACTGCAGCAATTCCCGTTTCTGGAATATTTGGT
GGACTAATAGCTGGTGCCATATTTGCAACATATGGCGATTACCCTGGTTGGAGGTACCTTTTCATATATGAAGGTATATT
AGCAATTATTGGTGGGATATTAGCATATTTTATTCTAACTGACTTTCCTAAAGATGCAAAATGGTTAAGTAATGAGGAAA
AAATTGCTATTCAAAATGCGTTTAAAGAGGAAGAAACGGAAAAGGTAAACGTTAAATGGACCAAGGCGTTAACTAATAGG
GATGTAATAATCCTTGCTATTGTATATTTTCTAGGAGTAACAAGTCTTTATGGTTATTCTATTTGGCTTCCATCTATTAT
AAGTTCATTTGGAAAAGTTAACGCGACTGTTGCAAGCTTCTTATCGGTAATACCATATGTAATAGCTTCAATTTCACTAA
TATTTATAGCGCATTTAGCTGATCGAACCCAAAGGCACAGATCTATTACCTCCATAGTATTTATAATTGCTGGTGTCGGC
TTGGGTTTAAGTGCATTAACGCAGAATATATTTGTTCTATCGTTTATCTTCTTCGCAATAGCTGCAATTGGAATATACAG
TTTTATAGCTACATTTTGGGCAGTTCCACAGAAGTTTTTACATGGTGATGCAGCTGCAGCAGCAATAGGTCTTATAAATG
CAGTAGGTAACTTAGGAGGAATTGTGGGACCTATAGTAGTGGGATTTCTGAAGTCATTCACTGGATCTTTTATAGATGGA
GTCTACATGATGGCACTATTCTCTTTCCTAGCAGGTTTGGTTATACTGCTCATAAGGAGAAGCTAA

Upstream 100 bases:

>100_bases
TAAATAATTAAATCTTTTGAGCAGAATATTAATTTAAACTTAAGAATAGCACTTATATCTATCATAAAGATTATTAACCA
GTTTTAACAATCTTTAAAAT

Downstream 100 bases:

>100_bases
TTCTTTTGAATATAATTAATTCCGTATTCCTCTATAAATTTGTTATTAGCAACAGCATGTCATTTTTATAAAAAGTTTTT
TGATCCCTGTGACTCTGGGA

Product: membrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKSLVESSRHKRYLRILPILFFLYIVNFLDRVNISYAIDAHMFQYLGVPTRQVGIIASLASSLFFIGYFIPQIFSNLGIN
RYGVRKIFLAAFTVWGIITILTGFVSSVSQVYVLRFLLGIAEGPFFAGVMFYLSLWFLKPERATANSFFTAAIPVSGIFG
GLIAGAIFATYGDYPGWRYLFIYEGILAIIGGILAYFILTDFPKDAKWLSNEEKIAIQNAFKEEETEKVNVKWTKALTNR
DVIILAIVYFLGVTSLYGYSIWLPSIISSFGKVNATVASFLSVIPYVIASISLIFIAHLADRTQRHRSITSIVFIIAGVG
LGLSALTQNIFVLSFIFFAIAAIGIYSFIATFWAVPQKFLHGDAAAAAIGLINAVGNLGGIVGPIVVGFLKSFTGSFIDG
VYMMALFSFLAGLVILLIRRS

Sequences:

>Translated_421_residues
MKSLVESSRHKRYLRILPILFFLYIVNFLDRVNISYAIDAHMFQYLGVPTRQVGIIASLASSLFFIGYFIPQIFSNLGIN
RYGVRKIFLAAFTVWGIITILTGFVSSVSQVYVLRFLLGIAEGPFFAGVMFYLSLWFLKPERATANSFFTAAIPVSGIFG
GLIAGAIFATYGDYPGWRYLFIYEGILAIIGGILAYFILTDFPKDAKWLSNEEKIAIQNAFKEEETEKVNVKWTKALTNR
DVIILAIVYFLGVTSLYGYSIWLPSIISSFGKVNATVASFLSVIPYVIASISLIFIAHLADRTQRHRSITSIVFIIAGVG
LGLSALTQNIFVLSFIFFAIAAIGIYSFIATFWAVPQKFLHGDAAAAAIGLINAVGNLGGIVGPIVVGFLKSFTGSFIDG
VYMMALFSFLAGLVILLIRRS
>Mature_421_residues
MKSLVESSRHKRYLRILPILFFLYIVNFLDRVNISYAIDAHMFQYLGVPTRQVGIIASLASSLFFIGYFIPQIFSNLGIN
RYGVRKIFLAAFTVWGIITILTGFVSSVSQVYVLRFLLGIAEGPFFAGVMFYLSLWFLKPERATANSFFTAAIPVSGIFG
GLIAGAIFATYGDYPGWRYLFIYEGILAIIGGILAYFILTDFPKDAKWLSNEEKIAIQNAFKEEETEKVNVKWTKALTNR
DVIILAIVYFLGVTSLYGYSIWLPSIISSFGKVNATVASFLSVIPYVIASISLIFIAHLADRTQRHRSITSIVFIIAGVG
LGLSALTQNIFVLSFIFFAIAAIGIYSFIATFWAVPQKFLHGDAAAAAIGLINAVGNLGGIVGPIVVGFLKSFTGSFIDG
VYMMALFSFLAGLVILLIRRS

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI154350196, Length=393, Percent_Identity=25.9541984732824, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI21322234, Length=371, Percent_Identity=23.1805929919137, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI6912666, Length=343, Percent_Identity=24.198250728863, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI87082071, Length=420, Percent_Identity=29.2857142857143, Blast_Score=202, Evalue=4e-53,
Organism=Escherichia coli, GI87082320, Length=396, Percent_Identity=23.7373737373737, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1789152, Length=417, Percent_Identity=25.8992805755396, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI2367379, Length=299, Percent_Identity=22.742474916388, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1789515, Length=414, Percent_Identity=24.8792270531401, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115533554, Length=408, Percent_Identity=23.7745098039216, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115533556, Length=408, Percent_Identity=23.7745098039216, Blast_Score=68, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6321698, Length=310, Percent_Identity=26.7741935483871, Blast_Score=85, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6322025, Length=297, Percent_Identity=24.2424242424242, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6323032, Length=227, Percent_Identity=25.1101321585903, Blast_Score=70, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6319876, Length=429, Percent_Identity=21.4452214452214, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI20130135, Length=413, Percent_Identity=24.2130750605327, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24655271, Length=413, Percent_Identity=24.2130750605327, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24658696, Length=398, Percent_Identity=23.6180904522613, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28573299, Length=392, Percent_Identity=23.2142857142857, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46426; Mature: 46426

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]