| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
Click here to switch to the map view.
The map label for this gene is 15898297
Identifier: 15898297
GI number: 15898297
Start: 1322991
End: 1324553
Strand: Direct
Name: 15898297
Synonym: SSO1464
Alternate gene names: NA
Gene position: 1322991-1324553 (Clockwise)
Preceding gene: 15898295
Following gene: 15898304
Centisome position: 44.21
GC content: 36.53
Gene sequence:
>1563_bases ATGAATAAATATATTTTAGTTTCTGTATTATTAATCTTGGTAACTGTAAGTGGAGTTATAGGTTACCTAGTGGGAAGTAC AAACCACGAAACTACGCAAACTATAGTACAAGGGCAAAAGATAATAGTATATCCACAGAGTGATCCTGCGAATTTAGGAA ATGGTGAAGACTACCTAATAAACCCAGTATTTCCATATCACACGATAGCTGCACAATATGCCTATGTTACTCCAGGTGAA GGTTTAGTATTTATAGGAAATCCCTACATTTCTGGTAATGGCTATTTAGCAGGTGCTAAAGGGGCTGCAGTAGTTTCCTC AATGTTAGCCTACCAACCCTTAACTAGCTATAACTATTATCTGTATATTAATTCTCCGAGTTGCATTAACGTGGGTGGTG CAGTAAAGACTGATTCCGCTACAGTTATGTATTTAGCATCAATGCTAAATGAACAATCTTCATTAAATAAGTCGTTATAC TTCTTAGGGGATGTTGGCTTAGAAGGTTACATGTACTCAACTGGTGTTGTATACCAAAGGATTGTACAATTGTATGAGGG AGGAATTTATTACTTGGTAGTTCCTCAAATGATGGCTCTGGCTGAGGGTCAAAATTACCAAATGGCATTACAATTCGCTA AAGAGCATGGAGAAGTTTTGTATACAGTCTCATCAATACCACAAATTTATCAAATAGTAACACAATCACAATTACCCCAA CAAAAAGGTTACATTGATTTCCCAATCAATTTCAGTGCTGGTTTTCAGTACTTAAGCCAAATTTACAGTACGTTGTACAA TGGAAGTATTAATGCTACTGCAAAGGCTATGGCTCAAAAGTATTGGAGTGAAGCTGAGAGTTTAGCAAAGAGTGGAAATT ATACCACCTTTTACTTCTTACCGAACCCCGCAGTTAACGCAATTGAATTACTTTATCAGAACAATTATAATTTATCAGCT GAAGTTGATAAGGCAATTTTAGAAGCAAGTAATTTGAGCAATTTGTGGAAGATCGAAACTGCTAGCGAAGCTGCATATTT ATTTACCGGTAATTTATCAGATAAGATATTGGCTAACGCTTGGGCTTCCTTGAGTTTGTCCATAAATGTAGGATCGTCCA TTACACCCTATGGTTTCTATCGGGGATTGTATAATGCGTTTATAATTGATTTATACGCAGCTGAGTATGTTGATAGTGTT ACCAACTCTCAATATGGTAACATTTCGCTACTATTACAAACGTATAGAAATCCTAACGTGATATATGACTTTGGTTTCTT CTCCAACTACTACGCTAAGATGAGTATAAAGTTTAGAGATTACTTCTTAAAGCAGTTGAACACTACGGATCAACAAGTAG TGTTGAATTCAATTTACTCATATATGGCAAACGAGACTCAAATACTTGAGAACGCAGCAGCCTATTACGATGGACCTTCA GTTGTCGGCTATTTAATGATGAGTCATGGAATGCAGACTCACAATTTGGCTCTACTTTACTATTCAATGCCCTTCACGAG GTTTGTCATGAATATGGAGGAGCTAACTTGGCAACTAGGATAA
Upstream 100 bases:
>100_bases TAACTAGTTTTCTCCAGTTTTAAATATCCATCTTTCAATTTTATATTAGATTTGGGAAAAAGCTTAAAAAAGGGAAATAT CTTCCTTTAAATCGATAAAA
Downstream 100 bases:
>100_bases GGTAAGATTCTCTTTTTTATTTTTATTTGTTAATATAAATTCTATTGATAACTTTATTCCCCTTATCATAGTATCTAAAC TCATGGATGGAATAGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MNKYILVSVLLILVTVSGVIGYLVGSTNHETTQTIVQGQKIIVYPQSDPANLGNGEDYLINPVFPYHTIAAQYAYVTPGE GLVFIGNPYISGNGYLAGAKGAAVVSSMLAYQPLTSYNYYLYINSPSCINVGGAVKTDSATVMYLASMLNEQSSLNKSLY FLGDVGLEGYMYSTGVVYQRIVQLYEGGIYYLVVPQMMALAEGQNYQMALQFAKEHGEVLYTVSSIPQIYQIVTQSQLPQ QKGYIDFPINFSAGFQYLSQIYSTLYNGSINATAKAMAQKYWSEAESLAKSGNYTTFYFLPNPAVNAIELLYQNNYNLSA EVDKAILEASNLSNLWKIETASEAAYLFTGNLSDKILANAWASLSLSINVGSSITPYGFYRGLYNAFIIDLYAAEYVDSV TNSQYGNISLLLQTYRNPNVIYDFGFFSNYYAKMSIKFRDYFLKQLNTTDQQVVLNSIYSYMANETQILENAAAYYDGPS VVGYLMMSHGMQTHNLALLYYSMPFTRFVMNMEELTWQLG
Sequences:
>Translated_520_residues MNKYILVSVLLILVTVSGVIGYLVGSTNHETTQTIVQGQKIIVYPQSDPANLGNGEDYLINPVFPYHTIAAQYAYVTPGE GLVFIGNPYISGNGYLAGAKGAAVVSSMLAYQPLTSYNYYLYINSPSCINVGGAVKTDSATVMYLASMLNEQSSLNKSLY FLGDVGLEGYMYSTGVVYQRIVQLYEGGIYYLVVPQMMALAEGQNYQMALQFAKEHGEVLYTVSSIPQIYQIVTQSQLPQ QKGYIDFPINFSAGFQYLSQIYSTLYNGSINATAKAMAQKYWSEAESLAKSGNYTTFYFLPNPAVNAIELLYQNNYNLSA EVDKAILEASNLSNLWKIETASEAAYLFTGNLSDKILANAWASLSLSINVGSSITPYGFYRGLYNAFIIDLYAAEYVDSV TNSQYGNISLLLQTYRNPNVIYDFGFFSNYYAKMSIKFRDYFLKQLNTTDQQVVLNSIYSYMANETQILENAAAYYDGPS VVGYLMMSHGMQTHNLALLYYSMPFTRFVMNMEELTWQLG >Mature_520_residues MNKYILVSVLLILVTVSGVIGYLVGSTNHETTQTIVQGQKIIVYPQSDPANLGNGEDYLINPVFPYHTIAAQYAYVTPGE GLVFIGNPYISGNGYLAGAKGAAVVSSMLAYQPLTSYNYYLYINSPSCINVGGAVKTDSATVMYLASMLNEQSSLNKSLY FLGDVGLEGYMYSTGVVYQRIVQLYEGGIYYLVVPQMMALAEGQNYQMALQFAKEHGEVLYTVSSIPQIYQIVTQSQLPQ QKGYIDFPINFSAGFQYLSQIYSTLYNGSINATAKAMAQKYWSEAESLAKSGNYTTFYFLPNPAVNAIELLYQNNYNLSA EVDKAILEASNLSNLWKIETASEAAYLFTGNLSDKILANAWASLSLSINVGSSITPYGFYRGLYNAFIIDLYAAEYVDSV TNSQYGNISLLLQTYRNPNVIYDFGFFSNYYAKMSIKFRDYFLKQLNTTDQQVVLNSIYSYMANETQILENAAAYYDGPS VVGYLMMSHGMQTHNLALLYYSMPFTRFVMNMEELTWQLG
Specific function: Unknown
COG id: COG1750
COG function: function code R; Archaeal serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57967; Mature: 57967
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKYILVSVLLILVTVSGVIGYLVGSTNHETTQTIVQGQKIIVYPQSDPANLGNGEDYLI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCEEE NPVFPYHTIAAQYAYVTPGEGLVFIGNPYISGNGYLAGAKGAAVVSSMLAYQPLTSYNYY CCCCCHHHHHHEEEEEECCCCEEEECCEEECCCCEEECCCHHHHHHHHHHHCCCCCCEEE LYINSPSCINVGGAVKTDSATVMYLASMLNEQSSLNKSLYFLGDVGLEGYMYSTGVVYQR EEECCCCEEECCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHH IVQLYEGGIYYLVVPQMMALAEGQNYQMALQFAKEHGEVLYTVSSIPQIYQIVTQSQLPQ HHHHHHCCEEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCC QKGYIDFPINFSAGFQYLSQIYSTLYNGSINATAKAMAQKYWSEAESLAKSGNYTTFYFL CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC PNPAVNAIELLYQNNYNLSAEVDKAILEASNLSNLWKIETASEAAYLFTGNLSDKILANA CCCCHHHHHHEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCHHHHHHC WASLSLSINVGSSITPYGFYRGLYNAFIIDLYAAEYVDSVTNSQYGNISLLLQTYRNPNV CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCE IYDFGFFSNYYAKMSIKFRDYFLKQLNTTDQQVVLNSIYSYMANETQILENAAAYYDGPS EEEECCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH VVGYLMMSHGMQTHNLALLYYSMPFTRFVMNMEELTWQLG HHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHEECC >Mature Secondary Structure MNKYILVSVLLILVTVSGVIGYLVGSTNHETTQTIVQGQKIIVYPQSDPANLGNGEDYLI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCEEE NPVFPYHTIAAQYAYVTPGEGLVFIGNPYISGNGYLAGAKGAAVVSSMLAYQPLTSYNYY CCCCCHHHHHHEEEEEECCCCEEEECCEEECCCCEEECCCHHHHHHHHHHHCCCCCCEEE LYINSPSCINVGGAVKTDSATVMYLASMLNEQSSLNKSLYFLGDVGLEGYMYSTGVVYQR EEECCCCEEECCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHH IVQLYEGGIYYLVVPQMMALAEGQNYQMALQFAKEHGEVLYTVSSIPQIYQIVTQSQLPQ HHHHHHCCEEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCC QKGYIDFPINFSAGFQYLSQIYSTLYNGSINATAKAMAQKYWSEAESLAKSGNYTTFYFL CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC PNPAVNAIELLYQNNYNLSAEVDKAILEASNLSNLWKIETASEAAYLFTGNLSDKILANA CCCCHHHHHHEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCHHHHHHC WASLSLSINVGSSITPYGFYRGLYNAFIIDLYAAEYVDSVTNSQYGNISLLLQTYRNPNV CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCE IYDFGFFSNYYAKMSIKFRDYFLKQLNTTDQQVVLNSIYSYMANETQILENAAAYYDGPS EEEECCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH VVGYLMMSHGMQTHNLALLYYSMPFTRFVMNMEELTWQLG HHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA