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The map label for this gene is 15898233

Identifier: 15898233

GI number: 15898233

Start: 1241293

End: 1241898

Strand: Direct

Name: 15898233

Synonym: SSO1392

Alternate gene names: NA

Gene position: 1241293-1241898 (Clockwise)

Preceding gene: 15898232

Following gene: 15898234

Centisome position: 41.48

GC content: 40.43

Gene sequence:

>606_bases
GTGAGAGTGATTGCATGTTTTATAAGGTTTGTCACCCTTAATGTATTAATGACAATAAGTGGGATTACGATAAAGCACTT
CGCCTATTGTCCTCAAATAGTTAGGATAGAGAGCATGGGGTTCACTGAGAGAGTGAGCGAGGCCATGATTGAGGGGGAAC
AAGTCGAGAAAGATAAGGTTATGAACTTCCTTTACGCTACGTTAAAACCGTTGAATGTTGTGGGAAAACCGATCTTTAGG
TATGGGGACTTGATCGGTTCACCGGACTACGTTTTGATTTACCCAAATCACTGGGTTCCACTTGACGTTAAGAGTGGGAG
GAAGAGGTATGATCACAAGTTGCAAATGAAGTATTACCTTTACTTAATGGACATGAATGGGATTAACGTGAAGGAGGGGT
TACTGTATTACGTTAGCCTTAAGGAAATGGTTAGGTTAGAGTACAATTACGCTGAGAAGAGGTATGTGGAGAAGGTTTTG
AGTAAGATAAGGGAAGCCATAAACGGTAAGGTGAGGGTTGTTCAAGACGCGAGGAAGTGCTATAATTGTGGATTTTTCGT
CTATTGTAAACCTAAAATAAAGGGAAATTTAGCTTATGTTGATTGA

Upstream 100 bases:

>100_bases
ATTCCCATTTCAGATTCCTTGAGGAGTGAGTTCTTGGACATGAGGGATAAGGCTCAAGACATAATGGATAAGGGTGTGGA
TCCTGGGATAGCTAAGGATT

Downstream 100 bases:

>100_bases
GAAAAAGCATACTAAAACGTATTAGCATTTGAAGATATATACATACTAAGCAGATTGTTGATAGGAAAGGAATATTATTG
GGTAAAACTGGTTTTTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MRVIACFIRFVTLNVLMTISGITIKHFAYCPQIVRIESMGFTERVSEAMIEGEQVEKDKVMNFLYATLKPLNVVGKPIFR
YGDLIGSPDYVLIYPNHWVPLDVKSGRKRYDHKLQMKYYLYLMDMNGINVKEGLLYYVSLKEMVRLEYNYAEKRYVEKVL
SKIREAINGKVRVVQDARKCYNCGFFVYCKPKIKGNLAYVD

Sequences:

>Translated_201_residues
MRVIACFIRFVTLNVLMTISGITIKHFAYCPQIVRIESMGFTERVSEAMIEGEQVEKDKVMNFLYATLKPLNVVGKPIFR
YGDLIGSPDYVLIYPNHWVPLDVKSGRKRYDHKLQMKYYLYLMDMNGINVKEGLLYYVSLKEMVRLEYNYAEKRYVEKVL
SKIREAINGKVRVVQDARKCYNCGFFVYCKPKIKGNLAYVD
>Mature_201_residues
MRVIACFIRFVTLNVLMTISGITIKHFAYCPQIVRIESMGFTERVSEAMIEGEQVEKDKVMNFLYATLKPLNVVGKPIFR
YGDLIGSPDYVLIYPNHWVPLDVKSGRKRYDHKLQMKYYLYLMDMNGINVKEGLLYYVSLKEMVRLEYNYAEKRYVEKVL
SKIREAINGKVRVVQDARKCYNCGFFVYCKPKIKGNLAYVD

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23547; Mature: 23547

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVIACFIRFVTLNVLMTISGITIKHFAYCPQIVRIESMGFTERVSEAMIEGEQVEKDKV
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHEEEECCCCHHHHHHHHHCCHHCCHHHH
MNFLYATLKPLNVVGKPIFRYGDLIGSPDYVLIYPNHWVPLDVKSGRKRYDHKLQMKYYL
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCEEEEECCCCCHHCCCEEEEEEEE
YLMDMNGINVKEGLLYYVSLKEMVRLEYNYAEKRYVEKVLSKIREAINGKVRVVQDARKC
EEEECCCCCHHHHHEEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHH
YNCGFFVYCKPKIKGNLAYVD
HCCCEEEEECCCCCCCEEEEC
>Mature Secondary Structure
MRVIACFIRFVTLNVLMTISGITIKHFAYCPQIVRIESMGFTERVSEAMIEGEQVEKDKV
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHEEEECCCCHHHHHHHHHCCHHCCHHHH
MNFLYATLKPLNVVGKPIFRYGDLIGSPDYVLIYPNHWVPLDVKSGRKRYDHKLQMKYYL
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCEEEEECCCCCHHCCCEEEEEEEE
YLMDMNGINVKEGLLYYVSLKEMVRLEYNYAEKRYVEKVLSKIREAINGKVRVVQDARKC
EEEECCCCCHHHHHEEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHH
YNCGFFVYCKPKIKGNLAYVD
HCCCEEEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA