Click here to switch to the map view.

The map label for this gene is 15898234

Identifier: 15898234

GI number: 15898234

Start: 1242456

End: 1243421

Strand: Direct

Name: 15898234

Synonym: SSO1393

Alternate gene names: NA

Gene position: 1242456-1243421 (Clockwise)

Preceding gene: 15898233

Following gene: 15898235

Centisome position: 41.52

GC content: 37.06

Gene sequence:

>966_bases
ATGGAAGTACACGTATGCTCTGTAGGAACTTCATTATTAAAGAATTCCCTAGATGATGATAACGTGAGGAAGGAGATTGA
AAGGCTTGGGCTAAAGGACTGGGATAGGCTTAAGTTTGACGATGATAGACAGAATAGGATAAAGGAAAATTTCGACTCAC
TTAGGAAAATGTTATTGAAATTCATCAGAAGTAAAGGTAGAAGAGCTTCAGCTGAACTAGATTCGTTGTTTTCCACTTTC
GAAAAGCTAAAGCACAATAAGAGTGAAATCTATGTTTTCCTTTACTCTACCAATACATCAAATTCGCAATTGGCAGGAGA
GGTTATAAGGGATTATCTAATTGAAGAGGGAATCAGATCTGAACTAGTTACTGTAAAGACCATATCGTCTGAGGAAAATT
TCTATGAGGGAATTGTGGATTTATTCGATAAAGTAATTTATAGAATATTGAAGTTTAAAGAGCAAGATAACGAGGTTTAT
ATCAACGCTACGCCGGGACTAAAGCCGGAATCCATATTTCTAACTTTGGCTGGTCTTTTAGCTGGTGCAGATTTAATCTA
CTATAAGTATCAAGAATTTAATGATGTGGTAATACTCCCTTCCCCTCCTATAACTATTAGGCCGAAATATTTAGATTGGT
TAATCAGATTCGCTATCTCCGGTTATACGCTATCTGAGAAGAGAGCTGAAGAACTGGGAATTCCGGTAAGGTTACTTGAA
GCTAAAATGCTTGTTGAGAGGAAAGGAGAGGATGCTTATAGATTAAAAGATTGGGTGAGGAAGTTGTTAGGTATTTATCT
ACCTATCGGAGCCCAAAATAAGTATTATAGAGTTATTGTTGAAGGAGAAGGTGAAAGGACGTTTGATAACGAAGTAGAGG
CTTATAATTATATGGAGAGTAAGAGGAAAGAAGGGAAGAATGTAAGGGTTGAAGTGCCGGATAGGGTGTATTTCCTTGGA
CTTTGA

Upstream 100 bases:

>100_bases
TTAAGATAATTTTAAATGAGTTTCAAATAAATGAATTTACTATCAATACCGGCACTTTAAAGCGAAATCTTTAAAAATCC
TTATATTTATTCCTTTTGTT

Downstream 100 bases:

>100_bases
GTTAGAAACTGAGGGTATAAAAGTTAGGGCTAAAGTAGACACTGGGTTTGATGGAGAAATCATTGTAACTAAGGAGATTT
TCGATAAGATACCATATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Protein

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MEVHVCSVGTSLLKNSLDDDNVRKEIERLGLKDWDRLKFDDDRQNRIKENFDSLRKMLLKFIRSKGRRASAELDSLFSTF
EKLKHNKSEIYVFLYSTNTSNSQLAGEVIRDYLIEEGIRSELVTVKTISSEENFYEGIVDLFDKVIYRILKFKEQDNEVY
INATPGLKPESIFLTLAGLLAGADLIYYKYQEFNDVVILPSPPITIRPKYLDWLIRFAISGYTLSEKRAEELGIPVRLLE
AKMLVERKGEDAYRLKDWVRKLLGIYLPIGAQNKYYRVIVEGEGERTFDNEVEAYNYMESKRKEGKNVRVEVPDRVYFLG
L

Sequences:

>Translated_321_residues
MEVHVCSVGTSLLKNSLDDDNVRKEIERLGLKDWDRLKFDDDRQNRIKENFDSLRKMLLKFIRSKGRRASAELDSLFSTF
EKLKHNKSEIYVFLYSTNTSNSQLAGEVIRDYLIEEGIRSELVTVKTISSEENFYEGIVDLFDKVIYRILKFKEQDNEVY
INATPGLKPESIFLTLAGLLAGADLIYYKYQEFNDVVILPSPPITIRPKYLDWLIRFAISGYTLSEKRAEELGIPVRLLE
AKMLVERKGEDAYRLKDWVRKLLGIYLPIGAQNKYYRVIVEGEGERTFDNEVEAYNYMESKRKEGKNVRVEVPDRVYFLG
L
>Mature_321_residues
MEVHVCSVGTSLLKNSLDDDNVRKEIERLGLKDWDRLKFDDDRQNRIKENFDSLRKMLLKFIRSKGRRASAELDSLFSTF
EKLKHNKSEIYVFLYSTNTSNSQLAGEVIRDYLIEEGIRSELVTVKTISSEENFYEGIVDLFDKVIYRILKFKEQDNEVY
INATPGLKPESIFLTLAGLLAGADLIYYKYQEFNDVVILPSPPITIRPKYLDWLIRFAISGYTLSEKRAEELGIPVRLLE
AKMLVERKGEDAYRLKDWVRKLLGIYLPIGAQNKYYRVIVEGEGERTFDNEVEAYNYMESKRKEGKNVRVEVPDRVYFLG
L

Specific function: Unknown

COG id: COG4006

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37448; Mature: 37448

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVHVCSVGTSLLKNSLDDDNVRKEIERLGLKDWDRLKFDDDRQNRIKENFDSLRKMLLK
CEEEEEECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FIRSKGRRASAELDSLFSTFEKLKHNKSEIYVFLYSTNTSNSQLAGEVIRDYLIEEGIRS
HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCHHH
ELVTVKTISSEENFYEGIVDLFDKVIYRILKFKEQDNEVYINATPGLKPESIFLTLAGLL
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
AGADLIYYKYQEFNDVVILPSPPITIRPKYLDWLIRFAISGYTLSEKRAEELGIPVRLLE
HCCHHEEEEECCCCCEEEECCCCCEECHHHHHHHHHHHHCCCEECHHHHHHCCCCHHHHH
AKMLVERKGEDAYRLKDWVRKLLGIYLPIGAQNKYYRVIVEGEGERTFDNEVEAYNYMES
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
KRKEGKNVRVEVPDRVYFLGL
HHHCCCCEEEECCCEEEEEEC
>Mature Secondary Structure
MEVHVCSVGTSLLKNSLDDDNVRKEIERLGLKDWDRLKFDDDRQNRIKENFDSLRKMLLK
CEEEEEECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FIRSKGRRASAELDSLFSTFEKLKHNKSEIYVFLYSTNTSNSQLAGEVIRDYLIEEGIRS
HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCHHH
ELVTVKTISSEENFYEGIVDLFDKVIYRILKFKEQDNEVYINATPGLKPESIFLTLAGLL
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
AGADLIYYKYQEFNDVVILPSPPITIRPKYLDWLIRFAISGYTLSEKRAEELGIPVRLLE
HCCHHEEEEECCCCCEEEECCCCCEECHHHHHHHHHHHHCCCEECHHHHHHCCCCHHHHH
AKMLVERKGEDAYRLKDWVRKLLGIYLPIGAQNKYYRVIVEGEGERTFDNEVEAYNYMES
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
KRKEGKNVRVEVPDRVYFLGL
HHHCCCCEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA