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The map label for this gene is 15898096

Identifier: 15898096

GI number: 15898096

Start: 1077940

End: 1078293

Strand: Reverse

Name: 15898096

Synonym: SSO1252

Alternate gene names: NA

Gene position: 1078293-1077940 (Counterclockwise)

Preceding gene: 15898098

Following gene: 15898095

Centisome position: 36.04

GC content: 33.05

Gene sequence:

>354_bases
TTGCTTATGAGCTTTCTTCTCAACAACGCTAAAAATTTCTTGCACGATGCAAGGAGAGATTTTGAGGAAGGAATTTGGAA
TTTATCGGTATTTCATTCAGAACAAGCACTGCAACTTTGCGTTAAATATAAATTATATATTCATTTAGGTGATTATCCTA
AAACTCATGATTTAAAGGTACTAATCAATAGTCTAGGGAGATTTGAGAAGGTAGAAATTGATGAGCTAATGCTGGATTTT
TTAGTACAATCTTATATCTCTTCTCGCTACTTACCTTATACTTTCTCAAAGGAGAGTGCTGAAAAAGCTTTAAACTTTGT
AGAGAATATGATGAGGGGTCTAGGATGTCTATAA

Upstream 100 bases:

>100_bases
TGATGATATAATTTTTCTACTAATTATCGAATAGGATAACGACATAAGAACACTTTACCTCATATAGTTTCAATAAATTT
AAATCGAGCAACATGAGTAA

Downstream 100 bases:

>100_bases
TCGAGGTCCTTGAGGAGAATAAGAGATTGAGAGATAATTACATAAAAAATTTAAATTTCTACCTAGATAGAATTAAAGAA
GTTGTTAAGAATATTGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain Protein

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MLMSFLLNNAKNFLHDARRDFEEGIWNLSVFHSEQALQLCVKYKLYIHLGDYPKTHDLKVLINSLGRFEKVEIDELMLDF
LVQSYISSRYLPYTFSKESAEKALNFVENMMRGLGCL

Sequences:

>Translated_117_residues
MLMSFLLNNAKNFLHDARRDFEEGIWNLSVFHSEQALQLCVKYKLYIHLGDYPKTHDLKVLINSLGRFEKVEIDELMLDF
LVQSYISSRYLPYTFSKESAEKALNFVENMMRGLGCL
>Mature_117_residues
MLMSFLLNNAKNFLHDARRDFEEGIWNLSVFHSEQALQLCVKYKLYIHLGDYPKTHDLKVLINSLGRFEKVEIDELMLDF
LVQSYISSRYLPYTFSKESAEKALNFVENMMRGLGCL

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13745; Mature: 13745

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMSFLLNNAKNFLHDARRDFEEGIWNLSVFHSEQALQLCVKYKLYIHLGDYPKTHDLKV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHH
LINSLGRFEKVEIDELMLDFLVQSYISSRYLPYTFSKESAEKALNFVENMMRGLGCL
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLMSFLLNNAKNFLHDARRDFEEGIWNLSVFHSEQALQLCVKYKLYIHLGDYPKTHDLKV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHH
LINSLGRFEKVEIDELMLDFLVQSYISSRYLPYTFSKESAEKALNFVENMMRGLGCL
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA