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The map label for this gene is 15897851

Identifier: 15897851

GI number: 15897851

Start: 831406

End: 832518

Strand: Direct

Name: 15897851

Synonym: SSO0972

Alternate gene names: NA

Gene position: 831406-832518 (Clockwise)

Preceding gene: 15897850

Following gene: 15897852

Centisome position: 27.79

GC content: 32.97

Gene sequence:

>1113_bases
TTGATAAACTCTTCGGAGGGAAAATCGGATAATAAAATAATTGAGAAAGCGACACAAATATTATCAAAATATCCCTTGTG
TGATAGCTGTCTAGGAAGATGTTTTGCAAGATTAGGATATGGATTAGAGAATAAAGAAAGGGGTAGGGCTATCAAGATTT
CGTTAATGTTAATCCTGGATGAAAAGATAAAAAATCATGAAATAGGTGACCTTAGCTCAATTAAAAGAATAATGGAGAAT
CTCGGACCGATAGCTGAAAAGTGGTATAAACTCTATTTCTCTTCAGAATTTCATAGCCACCCTTGCTATTTATGCCAAAA
TAAAATTGAAGATATAAAGGAAGATTTCTCCGATAAGGCGTTCAAGTTGTTATCTGGATTAGGTGTTAAAAGTTATGTAC
TTGGTGTTGAACTAGATGAGGAAACTAAGAAGAAGGAGAGTAAAATTATTGAAGAATTTACTCTAATGTACTACGAGAGT
ATAAAACACGAAATAAAAAGGGAAGTAGGTAAAACATTGTCGAAAAGAGGATATCCCCCAAATATGGACAACCCTGAAGT
AGAGATAGTTTATAGGCTTTCTGATCTGCAAGTGTTTATTATATCTAAAAATATAAGAACCTTTTACGTTTATAATCGTC
TAAATAGAAACCTACCTATATCCTCTTGGTTCTCTAAACAAGGAAATGAAGGACTGAATACTTTACTCCAGAGAAAGATC
GTTTTCGCGTTTTCTGAACCCACAACAGTAAGGATCCTCGCAGATTACCCTATTGTTATAGAAAATGAGGGAAGGGATAA
GATAGATGTAGGAGGATATTACATTTTCAAAGTGATGACTGTAGGAAAAAAGGAGTTACAAGCGATATCGGCTGCTAAAC
CAACTATGAGGAAATATAGAGTTACAGTTTATTCTACAAGTAGTCTTAGTGACGCTATAAGGGTATACGGAAATATATAT
GATCTCTACATAGACGCTAAATCATTTAGTGAGCTTAATGAGAAATTAAGTAAATTAAAGTCTCAATACGAAATTATAGT
ACTATCTGTTGATCTAATTGACGTTAAGGGGAGAATCAAAGATATAATTGAAAATTATCTAAAATCTTTTTAG

Upstream 100 bases:

>100_bases
GAAGGATCAGGGTTAGAGGTTGAAGAAGTAAGAGAACTTTTAGAGTGGTATAATAACATGAATAGGCTTTTGAAAATGGT
AAAAAGAAGGAGGGGCAATA

Downstream 100 bases:

>100_bases
TTTGGAAGAATATATGCTAGTTTATGAAGATAGGTCTTATAGGCCTAGGTATAATGGGATATAGAATAGCAGCCAATCTA
GCTAAGGCTAATAAACTTAA

Product: putative pseudouridylate synthase

Products: NA

Alternate protein names: THUMP Domain-Containing Protein; THUMP Domain Protein; Pseudouridine Synthase PsuX; Pseudouridylate Synthase-Like Protein

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MINSSEGKSDNKIIEKATQILSKYPLCDSCLGRCFARLGYGLENKERGRAIKISLMLILDEKIKNHEIGDLSSIKRIMEN
LGPIAEKWYKLYFSSEFHSHPCYLCQNKIEDIKEDFSDKAFKLLSGLGVKSYVLGVELDEETKKKESKIIEEFTLMYYES
IKHEIKREVGKTLSKRGYPPNMDNPEVEIVYRLSDLQVFIISKNIRTFYVYNRLNRNLPISSWFSKQGNEGLNTLLQRKI
VFAFSEPTTVRILADYPIVIENEGRDKIDVGGYYIFKVMTVGKKELQAISAAKPTMRKYRVTVYSTSSLSDAIRVYGNIY
DLYIDAKSFSELNEKLSKLKSQYEIIVLSVDLIDVKGRIKDIIENYLKSF

Sequences:

>Translated_370_residues
MINSSEGKSDNKIIEKATQILSKYPLCDSCLGRCFARLGYGLENKERGRAIKISLMLILDEKIKNHEIGDLSSIKRIMEN
LGPIAEKWYKLYFSSEFHSHPCYLCQNKIEDIKEDFSDKAFKLLSGLGVKSYVLGVELDEETKKKESKIIEEFTLMYYES
IKHEIKREVGKTLSKRGYPPNMDNPEVEIVYRLSDLQVFIISKNIRTFYVYNRLNRNLPISSWFSKQGNEGLNTLLQRKI
VFAFSEPTTVRILADYPIVIENEGRDKIDVGGYYIFKVMTVGKKELQAISAAKPTMRKYRVTVYSTSSLSDAIRVYGNIY
DLYIDAKSFSELNEKLSKLKSQYEIIVLSVDLIDVKGRIKDIIENYLKSF
>Mature_370_residues
MINSSEGKSDNKIIEKATQILSKYPLCDSCLGRCFARLGYGLENKERGRAIKISLMLILDEKIKNHEIGDLSSIKRIMEN
LGPIAEKWYKLYFSSEFHSHPCYLCQNKIEDIKEDFSDKAFKLLSGLGVKSYVLGVELDEETKKKESKIIEEFTLMYYES
IKHEIKREVGKTLSKRGYPPNMDNPEVEIVYRLSDLQVFIISKNIRTFYVYNRLNRNLPISSWFSKQGNEGLNTLLQRKI
VFAFSEPTTVRILADYPIVIENEGRDKIDVGGYYIFKVMTVGKKELQAISAAKPTMRKYRVTVYSTSSLSDAIRVYGNIY
DLYIDAKSFSELNEKLSKLKSQYEIIVLSVDLIDVKGRIKDIIENYLKSF

Specific function: Unknown

COG id: COG1258

COG function: function code J; Predicted pseudouridylate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42711; Mature: 42711

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSSEGKSDNKIIEKATQILSKYPLCDSCLGRCFARLGYGLENKERGRAIKISLMLILD
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEH
EKIKNHEIGDLSSIKRIMENLGPIAEKWYKLYFSSEFHSHPCYLCQNKIEDIKEDFSDKA
HHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
FKLLSGLGVKSYVLGVELDEETKKKESKIIEEFTLMYYESIKHEIKREVGKTLSKRGYPP
HHHHHCCCHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NMDNPEVEIVYRLSDLQVFIISKNIRTFYVYNRLNRNLPISSWFSKQGNEGLNTLLQRKI
CCCCCCEEEEEEECCEEEEEEECCCEEEEEEEHHCCCCCCHHHHHCCCCHHHHHHHHHHH
VFAFSEPTTVRILADYPIVIENEGRDKIDVGGYYIFKVMTVGKKELQAISAAKPTMRKYR
EEEECCCCEEEEEECCCEEEECCCCCEEEECCEEEEEEEHHCHHHHHHHHHCCCCHHHEE
VTVYSTSSLSDAIRVYGNIYDLYIDAKSFSELNEKLSKLKSQYEIIVLSVDLIDVKGRIK
EEEEECCHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCEEEEEEEEEEEEHHHHHH
DIIENYLKSF
HHHHHHHHCC
>Mature Secondary Structure
MINSSEGKSDNKIIEKATQILSKYPLCDSCLGRCFARLGYGLENKERGRAIKISLMLILD
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEH
EKIKNHEIGDLSSIKRIMENLGPIAEKWYKLYFSSEFHSHPCYLCQNKIEDIKEDFSDKA
HHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
FKLLSGLGVKSYVLGVELDEETKKKESKIIEEFTLMYYESIKHEIKREVGKTLSKRGYPP
HHHHHCCCHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NMDNPEVEIVYRLSDLQVFIISKNIRTFYVYNRLNRNLPISSWFSKQGNEGLNTLLQRKI
CCCCCCEEEEEEECCEEEEEEECCCEEEEEEEHHCCCCCCHHHHHCCCCHHHHHHHHHHH
VFAFSEPTTVRILADYPIVIENEGRDKIDVGGYYIFKVMTVGKKELQAISAAKPTMRKYR
EEEECCCCEEEEEECCCEEEECCCCCEEEECCEEEEEEEHHCHHHHHHHHHCCCCHHHEE
VTVYSTSSLSDAIRVYGNIYDLYIDAKSFSELNEKLSKLKSQYEIIVLSVDLIDVKGRIK
EEEEECCHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCEEEEEEEEEEEEHHHHHH
DIIENYLKSF
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA