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The map label for this gene is 15897793

Identifier: 15897793

GI number: 15897793

Start: 770599

End: 771720

Strand: Direct

Name: 15897793

Synonym: SSO0906

Alternate gene names: NA

Gene position: 770599-771720 (Clockwise)

Preceding gene: 15897792

Following gene: 15897794

Centisome position: 25.75

GC content: 37.7

Gene sequence:

>1122_bases
ATGATGTTAATTCCCGGTCCAGTTAATGTGCCGTATAGTGTTTTACAAGCCTCTCTTAATTTAGTGAATCATAGATCGGA
GAAATTTAGAGAAACAGTAAAAACATTGGAGTTTTTAATGAATAAACACTTTGGATCTACTCGTGTAGCGCTACTAAGCG
GCTCCGGCACTTTAGCAGTAGAGTCTATGGTCTATTCGTTAGTGAAAAGAGAGGAGAAAGTAATAACATTTCCTTATGGT
GAATTTGGACATAGATTAGAAGAATCGCTAATTAGACGTGGAGCAAAAGTAATTAGTTATCAGAAAAAATTGGGAGAATC
CTTCACTGTTGAGGAAATAAAAAAGGCTATTGAGGAAAATAAAGATGCTACCACAGTAGCGTTAGTTCACAATGAAACTA
GTACTGGTATAGCATTTAGAGACCTTAAAAAGATAGCTGATGTTGTAAAAGGCGTAGGGTTAAAGCTTCTTGTCGATTCA
GTATCAGGGTTTGCAGCTTATCCGCTTTATGTTAATCAATGGAAAATTGATTGTGTAGTAACTGGCAGCCAGAAGGCTTT
AGCAAGTATACCCGGGGTCGGATTTGCTGCGTTGTCTGAGGAGGGTGTGAATGAACTGGTAGAGTCAGATTTACCTAGTT
ATCTCGATTTATCATTTCACTTGAAGTTTCAGGATAAGGGAGAAACGCCATTTACTCCTACTGTGGGTGCGTTTTTTGCT
TCTCGAAGGGCTGCTGAATTGCTGGATAAGGAAGGAATAGAAAATAGATGGAAGAGACATGAAGCTTGTGCAAGGTATTT
AAGGGAAGTGATGTTGGAGATGGGATTTAAACTGTTAGGAAATGATACTAACTTTTCTAATACGGTAGTTGCGGCGTTTC
CTCCTATCCCTCTAGATACATTTATGTCAGAGTTAAAAAAGAGAAACATAGAGATTTCTAAGGGTATGGGGGAGTTAAGG
GATAAAATAGTAAGAATAGGAATTTTAGGTGTAGTTGACGATAGGGCAATTAGAAGATTAGTTGGTAGTATGGGTGAAAT
ACTTAAAAAGAATGTTGAATTTGAGGTTCCAAGAGAATGTAAGTTGCCGGAAGAGTTAAAAGTTGAAGTTTTATGGGATT
AG

Upstream 100 bases:

>100_bases
CTACTCACATTGGTGCCCAAACTAAAGAAGCACAGCATAGAGTTGCGGTAGTTACAACAGATAATCTCATTACTGCTTTA
AAGGAAATCGGTGTTCTCAA

Downstream 100 bases:

>100_bases
AGAGGGATGAAATTTTGTCCCAAGATTTACATTTTAATGAAGTTTTTATTTCCTTATGGCAGAATAGACTAACTAGATAC
GAGATTGCCAGAGTAATAAG

Product: soluble hydrogenase, small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MMLIPGPVNVPYSVLQASLNLVNHRSEKFRETVKTLEFLMNKHFGSTRVALLSGSGTLAVESMVYSLVKREEKVITFPYG
EFGHRLEESLIRRGAKVISYQKKLGESFTVEEIKKAIEENKDATTVALVHNETSTGIAFRDLKKIADVVKGVGLKLLVDS
VSGFAAYPLYVNQWKIDCVVTGSQKALASIPGVGFAALSEEGVNELVESDLPSYLDLSFHLKFQDKGETPFTPTVGAFFA
SRRAAELLDKEGIENRWKRHEACARYLREVMLEMGFKLLGNDTNFSNTVVAAFPPIPLDTFMSELKKRNIEISKGMGELR
DKIVRIGILGVVDDRAIRRLVGSMGEILKKNVEFEVPRECKLPEELKVEVLWD

Sequences:

>Translated_373_residues
MMLIPGPVNVPYSVLQASLNLVNHRSEKFRETVKTLEFLMNKHFGSTRVALLSGSGTLAVESMVYSLVKREEKVITFPYG
EFGHRLEESLIRRGAKVISYQKKLGESFTVEEIKKAIEENKDATTVALVHNETSTGIAFRDLKKIADVVKGVGLKLLVDS
VSGFAAYPLYVNQWKIDCVVTGSQKALASIPGVGFAALSEEGVNELVESDLPSYLDLSFHLKFQDKGETPFTPTVGAFFA
SRRAAELLDKEGIENRWKRHEACARYLREVMLEMGFKLLGNDTNFSNTVVAAFPPIPLDTFMSELKKRNIEISKGMGELR
DKIVRIGILGVVDDRAIRRLVGSMGEILKKNVEFEVPRECKLPEELKVEVLWD
>Mature_373_residues
MMLIPGPVNVPYSVLQASLNLVNHRSEKFRETVKTLEFLMNKHFGSTRVALLSGSGTLAVESMVYSLVKREEKVITFPYG
EFGHRLEESLIRRGAKVISYQKKLGESFTVEEIKKAIEENKDATTVALVHNETSTGIAFRDLKKIADVVKGVGLKLLVDS
VSGFAAYPLYVNQWKIDCVVTGSQKALASIPGVGFAALSEEGVNELVESDLPSYLDLSFHLKFQDKGETPFTPTVGAFFA
SRRAAELLDKEGIENRWKRHEACARYLREVMLEMGFKLLGNDTNFSNTVVAAFPPIPLDTFMSELKKRNIEISKGMGELR
DKIVRIGILGVVDDRAIRRLVGSMGEILKKNVEFEVPRECKLPEELKVEVLWD

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=369, Percent_Identity=26.2872628726287, Blast_Score=123, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17536281, Length=345, Percent_Identity=25.2173913043478, Blast_Score=98, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6321079, Length=362, Percent_Identity=24.0331491712707, Blast_Score=73, Evalue=6e-14,
Organism=Drosophila melanogaster, GI17530823, Length=348, Percent_Identity=22.7011494252874, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 41689; Mature: 41689

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLIPGPVNVPYSVLQASLNLVNHRSEKFRETVKTLEFLMNKHFGSTRVALLSGSGTLAV
CEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHH
ESMVYSLVKREEKVITFPYGEFGHRLEESLIRRGAKVISYQKKLGESFTVEEIKKAIEEN
HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
KDATTVALVHNETSTGIAFRDLKKIADVVKGVGLKLLVDSVSGFAAYPLYVNQWKIDCVV
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCEEEEEEEEEEEE
TGSQKALASIPGVGFAALSEEGVNELVESDLPSYLDLSFHLKFQDKGETPFTPTVGAFFA
ECCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHH
SRRAAELLDKEGIENRWKRHEACARYLREVMLEMGFKLLGNDTNFSNTVVAAFPPIPLDT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCEEEEECCCCCHHH
FMSELKKRNIEISKGMGELRDKIVRIGILGVVDDRAIRRLVGSMGEILKKNVEFEVPREC
HHHHHHHCCCCHHCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC
KLPEELKVEVLWD
CCCHHCCEEEECC
>Mature Secondary Structure
MMLIPGPVNVPYSVLQASLNLVNHRSEKFRETVKTLEFLMNKHFGSTRVALLSGSGTLAV
CEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHH
ESMVYSLVKREEKVITFPYGEFGHRLEESLIRRGAKVISYQKKLGESFTVEEIKKAIEEN
HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
KDATTVALVHNETSTGIAFRDLKKIADVVKGVGLKLLVDSVSGFAAYPLYVNQWKIDCVV
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCEEEEEEEEEEEE
TGSQKALASIPGVGFAALSEEGVNELVESDLPSYLDLSFHLKFQDKGETPFTPTVGAFFA
ECCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHH
SRRAAELLDKEGIENRWKRHEACARYLREVMLEMGFKLLGNDTNFSNTVVAAFPPIPLDT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCEEEEECCCCCHHH
FMSELKKRNIEISKGMGELRDKIVRIGILGVVDDRAIRRLVGSMGEILKKNVEFEVPREC
HHHHHHHCCCCHHCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC
KLPEELKVEVLWD
CCCHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]