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The map label for this gene is yigC [C]

Identifier: 15897770

GI number: 15897770

Start: 749413

End: 750879

Strand: Direct

Name: yigC [C]

Synonym: SSO0879

Alternate gene names: 15897770

Gene position: 749413-750879 (Clockwise)

Preceding gene: 15897764

Following gene: 15897772

Centisome position: 25.05

GC content: 34.9

Gene sequence:

>1467_bases
TTGTTGAAGTATAGTAATCATATGGCGTTTAAAGATCTCAGAGAATATATCGAATTTATGAAAAAGAAAGGTAAATTAAT
TGAAGTAGATGATGAAGTAAGCGTTGATTTAGAAATAGCTGAAATAACGAGAAAAGCAACTTATGCTCATTTACCCCCTC
TTTTATTCAAGAGAGTTAAAAATTATGAGAATTGGAAAATAGTTTCCAATATTTTTTACTCAATTGAAAGCTTGTACGAG
ATTTTTGGAACGAATAAACTAGAATCAATATCCGAAGGATTTTTATCAAATTTATCCAATATGCCTATCACATTTTTTGA
TAAAATAAAATCACTTAGAGAAATTTTGGGATTAGGAAAAGTAATGCCTAAAGCTAAGTCACCTAGTTTTAAAGAGGAAA
AGAACTTAGATCTGACTAAGATTCCTGCAATAAAAACTTGGCCTAAAGATGCCGGAAGATACCTTACTTTTTCCATAACA
ATAACAAAGGACCCAGAGACAGATGTACATAATCTCAGCGTTTATAGGGTTCAAATTCTAAACGAGAAGGAGGCAATAAT
TCATTGGCAAGCATTTAAAAGGGGTGCGCTTACTGCTAAAAAATATTTAGAAAAAGGTATTAGTAAGATACCTATTGCCG
TAGTAACCGGAGTAGATCCTGCCATAGCATTTACAGCGGCTTCTCCAGTCCCTCATGGAATCGATAAGTATATGTTCGCG
GGAATCTTGAGAGGTGAGGGTATTGACGTAGCTGAATTAGATAATCAATTACTAGTACCAAGCCATTCAGAAGTAGTTTT
AACTGGTTATGTTGACTTGAATGATATGCGTCTAGAGGGTCCCTTTGGAGATCATATGGGTTATTATACACCTGCAGATT
ACTATCCAGTTTTCAAATTGGAAAGAGTATATATTAGAGAAGATCCTATATTTCATGTAACATCAGTTGGCAAACCACCA
CTTGAGGATGCTTGGATAGGTAAGGCTGTAGAAAGAATATTCTTACCTTTTGCCAAGATGTTAGTTCCAGAACTTATTGA
CATGAACCTACCAGAATATGGATTGTTTACCGGGATTGGGATCTTCTCTATAAAGAAGTATTACCCCGGCCAGGCCAAGA
GAGTTATGATGGCTTTATGGGGTACCGGCCAACTAAGCCTTTTAAAAATAATAATAGTTGTTGATCAAGATATAGATGTT
CATGATATTAATCAAGTTATTTATGCTATTGCAGCTAATGTAGATCCTAAACGCGATGTTTGGGTAATAGAAAATGCACT
TACTGACTCATTAGACCCTAGTGTTCCATTTCCACCATTAGGTAGCAAACTAGGTATAGATGCTACTAGGAAATTTAAAG
AAGAAATGGGGAAAGAATGGCCAGAAGAGGTTAGATCAGATGAGGTAGTAGCTAAAAAAGCGGACCAAATATTGAATAAA
ATTATAAAGAGATATCAAACCTCCTAA

Upstream 100 bases:

>100_bases
TTTCATATCCACAATTCAAGCACTTCATTATTCCGCTTAGGCTGTTTCCAACAACATTTCACCAGCTGTTTAAAGTGGTT
TGTTCTGCAAAATATAAGCT

Downstream 100 bases:

>100_bases
CCATCATTGTGTCTCTATATATTATTGAAATCTCACTTATATCCTCCAGCCTAGTTTCTATTTCTAATGACTCATTTTTC
CTTAATTCTTTATTCACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MLKYSNHMAFKDLREYIEFMKKKGKLIEVDDEVSVDLEIAEITRKATYAHLPPLLFKRVKNYENWKIVSNIFYSIESLYE
IFGTNKLESISEGFLSNLSNMPITFFDKIKSLREILGLGKVMPKAKSPSFKEEKNLDLTKIPAIKTWPKDAGRYLTFSIT
ITKDPETDVHNLSVYRVQILNEKEAIIHWQAFKRGALTAKKYLEKGISKIPIAVVTGVDPAIAFTAASPVPHGIDKYMFA
GILRGEGIDVAELDNQLLVPSHSEVVLTGYVDLNDMRLEGPFGDHMGYYTPADYYPVFKLERVYIREDPIFHVTSVGKPP
LEDAWIGKAVERIFLPFAKMLVPELIDMNLPEYGLFTGIGIFSIKKYYPGQAKRVMMALWGTGQLSLLKIIIVVDQDIDV
HDINQVIYAIAANVDPKRDVWVIENALTDSLDPSVPFPPLGSKLGIDATRKFKEEMGKEWPEEVRSDEVVAKKADQILNK
IIKRYQTS

Sequences:

>Translated_488_residues
MLKYSNHMAFKDLREYIEFMKKKGKLIEVDDEVSVDLEIAEITRKATYAHLPPLLFKRVKNYENWKIVSNIFYSIESLYE
IFGTNKLESISEGFLSNLSNMPITFFDKIKSLREILGLGKVMPKAKSPSFKEEKNLDLTKIPAIKTWPKDAGRYLTFSIT
ITKDPETDVHNLSVYRVQILNEKEAIIHWQAFKRGALTAKKYLEKGISKIPIAVVTGVDPAIAFTAASPVPHGIDKYMFA
GILRGEGIDVAELDNQLLVPSHSEVVLTGYVDLNDMRLEGPFGDHMGYYTPADYYPVFKLERVYIREDPIFHVTSVGKPP
LEDAWIGKAVERIFLPFAKMLVPELIDMNLPEYGLFTGIGIFSIKKYYPGQAKRVMMALWGTGQLSLLKIIIVVDQDIDV
HDINQVIYAIAANVDPKRDVWVIENALTDSLDPSVPFPPLGSKLGIDATRKFKEEMGKEWPEEVRSDEVVAKKADQILNK
IIKRYQTS
>Mature_488_residues
MLKYSNHMAFKDLREYIEFMKKKGKLIEVDDEVSVDLEIAEITRKATYAHLPPLLFKRVKNYENWKIVSNIFYSIESLYE
IFGTNKLESISEGFLSNLSNMPITFFDKIKSLREILGLGKVMPKAKSPSFKEEKNLDLTKIPAIKTWPKDAGRYLTFSIT
ITKDPETDVHNLSVYRVQILNEKEAIIHWQAFKRGALTAKKYLEKGISKIPIAVVTGVDPAIAFTAASPVPHGIDKYMFA
GILRGEGIDVAELDNQLLVPSHSEVVLTGYVDLNDMRLEGPFGDHMGYYTPADYYPVFKLERVYIREDPIFHVTSVGKPP
LEDAWIGKAVERIFLPFAKMLVPELIDMNLPEYGLFTGIGIFSIKKYYPGQAKRVMMALWGTGQLSLLKIIIVVDQDIDV
HDINQVIYAIAANVDPKRDVWVIENALTDSLDPSVPFPPLGSKLGIDATRKFKEEMGKEWPEEVRSDEVVAKKADQILNK
IIKRYQTS

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=489, Percent_Identity=33.7423312883436, Blast_Score=301, Evalue=6e-83,
Organism=Saccharomyces cerevisiae, GI6320748, Length=461, Percent_Identity=24.9457700650759, Blast_Score=111, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 55415; Mature: 55415

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYSNHMAFKDLREYIEFMKKKGKLIEVDDEVSVDLEIAEITRKATYAHLPPLLFKRVK
CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEHHHHHHHHHHHHCCHHHHHHHC
NYENWKIVSNIFYSIESLYEIFGTNKLESISEGFLSNLSNMPITFFDKIKSLREILGLGK
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VMPKAKSPSFKEEKNLDLTKIPAIKTWPKDAGRYLTFSITITKDPETDVHNLSVYRVQIL
HCCCCCCCCCCHHCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEE
NEKEAIIHWQAFKRGALTAKKYLEKGISKIPIAVVTGVDPAIAFTAASPVPHGIDKYMFA
CCCCCEEEHHHHHCCCHHHHHHHHCCHHHCCEEEEECCCCCEEEEECCCCCCCHHHHHHH
GILRGEGIDVAELDNQLLVPSHSEVVLTGYVDLNDMRLEGPFGDHMGYYTPADYYPVFKL
HHHCCCCCCHHHCCCEEECCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEE
ERVYIREDPIFHVTSVGKPPLEDAWIGKAVERIFLPFAKMLVPELIDMNLPEYGLFTGIG
EEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCH
IFSIKKYYPGQAKRVMMALWGTGQLSLLKIIIVVDQDIDVHDINQVIYAIAANVDPKRDV
HHHHHHCCCCHHHEEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCE
WVIENALTDSLDPSVPFPPLGSKLGIDATRKFKEEMGKEWPEEVRSDEVVAKKADQILNK
EEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHH
IIKRYQTS
HHHHHCCC
>Mature Secondary Structure
MLKYSNHMAFKDLREYIEFMKKKGKLIEVDDEVSVDLEIAEITRKATYAHLPPLLFKRVK
CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEHHHHHHHHHHHHCCHHHHHHHC
NYENWKIVSNIFYSIESLYEIFGTNKLESISEGFLSNLSNMPITFFDKIKSLREILGLGK
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VMPKAKSPSFKEEKNLDLTKIPAIKTWPKDAGRYLTFSITITKDPETDVHNLSVYRVQIL
HCCCCCCCCCCHHCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEE
NEKEAIIHWQAFKRGALTAKKYLEKGISKIPIAVVTGVDPAIAFTAASPVPHGIDKYMFA
CCCCCEEEHHHHHCCCHHHHHHHHCCHHHCCEEEEECCCCCEEEEECCCCCCCHHHHHHH
GILRGEGIDVAELDNQLLVPSHSEVVLTGYVDLNDMRLEGPFGDHMGYYTPADYYPVFKL
HHHCCCCCCHHHCCCEEECCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEE
ERVYIREDPIFHVTSVGKPPLEDAWIGKAVERIFLPFAKMLVPELIDMNLPEYGLFTGIG
EEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCH
IFSIKKYYPGQAKRVMMALWGTGQLSLLKIIIVVDQDIDVHDINQVIYAIAANVDPKRDV
HHHHHHCCCCHHHEEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCE
WVIENALTDSLDPSVPFPPLGSKLGIDATRKFKEEMGKEWPEEVRSDEVVAKKADQILNK
EEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHH
IIKRYQTS
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]