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The map label for this gene is yfhQ [C]

Identifier: 15897647

GI number: 15897647

Start: 633839

End: 634552

Strand: Reverse

Name: yfhQ [C]

Synonym: SSO0747

Alternate gene names: 15897647

Gene position: 634552-633839 (Counterclockwise)

Preceding gene: 15897648

Following gene: 15897646

Centisome position: 21.21

GC content: 32.91

Gene sequence:

>714_bases
ATGATAAGGGTAGTATTAGTGGAGCCTGAGGGTGAATACAATATTGGTTTTGTTGCTAGATTATGTAAAAATTTTTTGGT
TGATGAACTTTATATAGTTAATCCAAGGGCTAACATTTCCGAAGCTTTTAGGTTTTCCGCTGGCGGGAGAGAGATCTTAG
AGAAAGCTAAAATTGTGAATACTTTTGATAAAGCTATAAATGATGTTGATATTAAGATAGCTACTTCTAGTATAGCAGAT
AATAATGGAGATATTTTAAGGAAGTCCATAAGACCTTGGGAAATATTGCCTTTAATTCAAGGTAAGAAGATCGCATTAAT
TTTCGGTAGAGAGAGCGTTGGTTTAACTAGGGAAGAAATATTCAAATGCGATTTTCTTCTTTATATTCCAGCTAATCCTA
GTTATCCGGTTCTTAATCTTTCACATGCTGTCGGCATAGTATTATATGAAATTTGGAAAAATAGAGAATTATTGACCAAT
CCTCAGACTTCTACAATTTCAGATCAATCCATAAAATTAATAGATAAATATACTGAAATCCTTTATAAATTGCTTAAAAG
GTCTGATGATGATTATAAGATGTATATAGCACTAAAGCGCGCAATAATAAAGGGAGTAAAGGACGAGGAAGAGGCTAGGG
TCATCGTGCACTTTTTGAGAAAACTTTATACCAGAATAATCCACAATGAAAAGGAGATGAATAATGTCAGCTAA

Upstream 100 bases:

>100_bases
ATAGTATATGCTATTAATAAGTGGAGATTCAAAATTTCACAGAAGTACGAGAAGGTTATCGGTTATGAGAGACTTATAGG
ATTAGAGTTGGTGAAGGAGT

Downstream 100 bases:

>100_bases
AGGAGGAGCAATTAAGGATAAGTGGAAAATGAAGAAATGGTACAGCGTAATAACGCCTAAAGCCTTTGGAGAGGTTTCGC
TAGGCTCTACCCCAGCCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIRVVLVEPEGEYNIGFVARLCKNFLVDELYIVNPRANISEAFRFSAGGREILEKAKIVNTFDKAINDVDIKIATSSIAD
NNGDILRKSIRPWEILPLIQGKKIALIFGRESVGLTREEIFKCDFLLYIPANPSYPVLNLSHAVGIVLYEIWKNRELLTN
PQTSTISDQSIKLIDKYTEILYKLLKRSDDDYKMYIALKRAIIKGVKDEEEARVIVHFLRKLYTRIIHNEKEMNNVS

Sequences:

>Translated_237_residues
MIRVVLVEPEGEYNIGFVARLCKNFLVDELYIVNPRANISEAFRFSAGGREILEKAKIVNTFDKAINDVDIKIATSSIAD
NNGDILRKSIRPWEILPLIQGKKIALIFGRESVGLTREEIFKCDFLLYIPANPSYPVLNLSHAVGIVLYEIWKNRELLTN
PQTSTISDQSIKLIDKYTEILYKLLKRSDDDYKMYIALKRAIIKGVKDEEEARVIVHFLRKLYTRIIHNEKEMNNVS
>Mature_237_residues
MIRVVLVEPEGEYNIGFVARLCKNFLVDELYIVNPRANISEAFRFSAGGREILEKAKIVNTFDKAINDVDIKIATSSIAD
NNGDILRKSIRPWEILPLIQGKKIALIFGRESVGLTREEIFKCDFLLYIPANPSYPVLNLSHAVGIVLYEIWKNRELLTN
PQTSTISDQSIKLIDKYTEILYKLLKRSDDDYKMYIALKRAIIKGVKDEEEARVIVHFLRKLYTRIIHNEKEMNNVS

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=245, Percent_Identity=31.8367346938775, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1790865, Length=197, Percent_Identity=30.9644670050761, Blast_Score=88, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27290; Mature: 27290

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVVLVEPEGEYNIGFVARLCKNFLVDELYIVNPRANISEAFRFSAGGREILEKAKIVN
CEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHH
TFDKAINDVDIKIATSSIADNNGDILRKSIRPWEILPLIQGKKIALIFGRESVGLTREEI
HHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCCHHHH
FKCDFLLYIPANPSYPVLNLSHAVGIVLYEIWKNRELLTNPQTSTISDQSIKLIDKYTEI
HEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHH
LYKLLKRSDDDYKMYIALKRAIIKGVKDEEEARVIVHFLRKLYTRIIHNEKEMNNVS
HHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure
MIRVVLVEPEGEYNIGFVARLCKNFLVDELYIVNPRANISEAFRFSAGGREILEKAKIVN
CEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHH
TFDKAINDVDIKIATSSIADNNGDILRKSIRPWEILPLIQGKKIALIFGRESVGLTREEI
HHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCCHHHH
FKCDFLLYIPANPSYPVLNLSHAVGIVLYEIWKNRELLTNPQTSTISDQSIKLIDKYTEI
HEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHH
LYKLLKRSDDDYKMYIALKRAIIKGVKDEEEARVIVHFLRKLYTRIIHNEKEMNNVS
HHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]