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The map label for this gene is rps3AE [H]

Identifier: 15897646

GI number: 15897646

Start: 633223

End: 633849

Strand: Reverse

Name: rps3AE [H]

Synonym: SSO0746

Alternate gene names: 15897646

Gene position: 633849-633223 (Counterclockwise)

Preceding gene: 15897647

Following gene: 15897645

Centisome position: 21.18

GC content: 35.73

Gene sequence:

>627_bases
ATGTCAGCTAAAGGAGGAGCAATTAAGGATAAGTGGAAAATGAAGAAATGGTACAGCGTAATAACGCCTAAAGCCTTTGG
AGAGGTTTCGCTAGGCTCTACCCCAGCCTACGACATAACTCAAACTATAGGAAGAAGAGTTGAGACGACTCTATACGATC
TCACTGGTGATTTCAGCCAAGTTTATGTCCACTTATATTTTAAAATTATAGGTAATGAAGGGGATAGATTAATTACAAGA
TTTGTAGGGCATGAACTCTCAAGGGATTACTTAAGATCTTTAATTAGGAGAAAAAGTTCTAAAATAAATAGTATATTCGA
TGTTACTACTAAGGATGGTTATGTGGTAAGGGTTAAGGGATTAGTTCTGACTACGTATAAATGCCATCAATCCCAAAAAA
CAGCGATTAGAAAAATAATTAATGAGACCGTATCTAAAAAAGCCAGTGAACTTTCTTTCGATGATTTTACGCAAGAGGTA
GTATTTGGGAGATTAGCTAACGAAATATTTGAAGCAGCAAAGAAGATATATCCACTAAGGAAGGCTGAGATAGAAAAAAC
TAAAGTGCTTAAAGTACCAGAAAATTTAGGTAAACAAGTTGAAAGCAGTAGTGTTAGCAGCGGGTAA

Upstream 100 bases:

>100_bases
ATAATAAAGGGAGTAAAGGACGAGGAAGAGGCTAGGGTCATCGTGCACTTTTTGAGAAAACTTTATACCAGAATAATCCA
CAATGAAAAGGAGATGAATA

Downstream 100 bases:

>100_bases
AGGAGAGAGATTAGAACCAATAACCCATACAAGACCTAAACCTTTTGTTCCTGTTCTTGAAACTCCCTTAATTTTAAGGC
ATATTCGGATATTAAAGAAA

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSAKGGAIKDKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRVETTLYDLTGDFSQVYVHLYFKIIGNEGDRLITR
FVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVKGLVLTTYKCHQSQKTAIRKIINETVSKKASELSFDDFTQEV
VFGRLANEIFEAAKKIYPLRKAEIEKTKVLKVPENLGKQVESSSVSSG

Sequences:

>Translated_208_residues
MSAKGGAIKDKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRVETTLYDLTGDFSQVYVHLYFKIIGNEGDRLITR
FVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVKGLVLTTYKCHQSQKTAIRKIINETVSKKASELSFDDFTQEV
VFGRLANEIFEAAKKIYPLRKAEIEKTKVLKVPENLGKQVESSSVSSG
>Mature_207_residues
SAKGGAIKDKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRVETTLYDLTGDFSQVYVHLYFKIIGNEGDRLITRF
VGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVKGLVLTTYKCHQSQKTAIRKIINETVSKKASELSFDDFTQEVV
FGRLANEIFEAAKKIYPLRKAEIEKTKVLKVPENLGKQVESSSVSSG

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family [H]

Homologues:

Organism=Homo sapiens, GI4506723, Length=214, Percent_Identity=27.5700934579439, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17553700, Length=212, Percent_Identity=26.8867924528302, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323474, Length=203, Percent_Identity=28.0788177339901, Blast_Score=85, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6323577, Length=201, Percent_Identity=27.363184079602, Blast_Score=85, Evalue=9e-18,
Organism=Drosophila melanogaster, GI17864162, Length=205, Percent_Identity=27.3170731707317, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24638499, Length=161, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001593 [H]

Pfam domain/function: PF01015 Ribosomal_S3Ae [H]

EC number: NA

Molecular weight: Translated: 23542; Mature: 23411

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKGGAIKDKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRVETTLYDLTGDFSQ
CCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
VYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVKG
HHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEC
LVLTTYKCHQSQKTAIRKIINETVSKKASELSFDDFTQEVVFGRLANEIFEAAKKIYPLR
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KAEIEKTKVLKVPENLGKQVESSSVSSG
HHHHHHHHHEECCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAKGGAIKDKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRVETTLYDLTGDFSQ
CCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
VYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVKG
HHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEC
LVLTTYKCHQSQKTAIRKIINETVSKKASELSFDDFTQEVVFGRLANEIFEAAKKIYPLR
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KAEIEKTKVLKVPENLGKQVESSSVSSG
HHHHHHHHHEECCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA