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The map label for this gene is rpl19e

Identifier: 15897606

GI number: 15897606

Start: 603389

End: 603844

Strand: Reverse

Name: rpl19e

Synonym: SSO0700

Alternate gene names: 15897606

Gene position: 603844-603389 (Counterclockwise)

Preceding gene: 15897607

Following gene: 161777476

Centisome position: 20.18

GC content: 36.84

Gene sequence:

>456_bases
ATGACTAACTTGAAAGCGCAAAAAAGATTAGCAGCATCGATTGCAGGGGTAGGTATAAACAGAATTAAGGTCGTTGAGGA
TTACATTGAGGATGTTCAAAGCTCATTAACCAGAGATGAAATTAGAAATTTAATAAAAGATGGTAAGATTATAGTCCTAA
AAAAGGTTGGAATAAGCGGTGGTAGATTAAAGGAAAGGCGAAAGAAGAGGAGCCTTAAGAGCGAAGGAAAGAAGTCAGGG
AGCAGAAAAGGCAAGAAGGGAGCAAGGGCTAATAGTAAACAAATGTGGGTTAAAAGGGTAAGAAAAATAAGAGCTTATCT
AAAGTGGTTGAGAGATCATAAGGTTATTGATAGACATACTTACAGGGAATTATACTTAAAAACGAAAGGCGGCAACTATA
AGGGAGTTTCTGATGTCAGAAATGTCCTAATACAAATGGGGAAAATTAAAGGGTGA

Upstream 100 bases:

>100_bases
TTGTAACTATATCTTCTTCAGTTGGTTTTAAAAAGAGGCTTGAAATTCTAAATAAAGCTAGGGAATTGGGTCTGAAAGTA
AGTAATGAGGGTGTAGTTAC

Downstream 100 bases:

>100_bases
ATAAATTGGCCAATGGTCCTAATTATAAGGTAAAACCCAGAAGAAGAAGAGAAGGAAAAACTAACTACTATAAAAGATAT
GTCTATGTTATAAGTAAACA

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISGGRLKERRKKRSLKSEGKKSG
SRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYKGVSDVRNVLIQMGKIKG

Sequences:

>Translated_151_residues
MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISGGRLKERRKKRSLKSEGKKSG
SRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYKGVSDVRNVLIQMGKIKG
>Mature_150_residues
TNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISGGRLKERRKKRSLKSEGKKSGS
RKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYKGVSDVRNVLIQMGKIKG

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family

Homologues:

Organism=Caenorhabditis elegans, GI17508673, Length=130, Percent_Identity=33.0769230769231, Blast_Score=73, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6319559, Length=136, Percent_Identity=37.5, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319444, Length=136, Percent_Identity=37.5, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45552831, Length=137, Percent_Identity=38.6861313868613, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI17136322, Length=137, Percent_Identity=38.6861313868613, Blast_Score=84, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL19_SULSO (Q9UX89)

Other databases:

- EMBL:   Y18930
- EMBL:   AE006641
- PIR:   B90218
- RefSeq:   NP_342211.1
- ProteinModelPortal:   Q9UX89
- SMR:   Q9UX89
- GeneID:   1454968
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO0700
- NMPDR:   fig|273057.1.peg.634
- HOGENOM:   HBG748852
- OMA:   MAKGGAF
- PhylomeDB:   Q9UX89
- ProtClustDB:   PRK08570
- BioCyc:   SSOL273057:SSO0700-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015974
- Gene3D:   G3DSA:1.10.1650.10
- Gene3D:   G3DSA:1.10.1200.60

Pfam domain/function: PF01280 Ribosomal_L19e; SSF48140 Ribosomal_L19/L19e

EC number: NA

Molecular weight: Translated: 17287; Mature: 17156

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: PS00526 RIBOSOMAL_L19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISG
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
GRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHT
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRELYLKTKGGNYKGVSDVRNVLIQMGKIKG
HHHHHEECCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
GRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHT
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRELYLKTKGGNYKGVSDVRNVLIQMGKIKG
HHHHHEECCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10701121; 11427726