Click here to switch to the map view.

The map label for this gene is 15897392

Identifier: 15897392

GI number: 15897392

Start: 397707

End: 398309

Strand: Reverse

Name: 15897392

Synonym: SSO0464

Alternate gene names: NA

Gene position: 398309-397707 (Counterclockwise)

Preceding gene: 15897393

Following gene: 15897391

Centisome position: 13.31

GC content: 36.15

Gene sequence:

>603_bases
ATGTCTTGGGATATAAGATACTTAGAATGGAGATTCGCCAACCTAAATGAGATCACTTCCTTTTTACTTGCTGCCTTATC
TTTAGCAGTAGCTTATATACGCCCAACATCAATACTTTCAGATCCAATAGGTAGTATAATCATACCATATATCGTAGCAT
TATTAGCTATAATACCACATGAAATAGGCCACAGACAAGCTGCGAGAAGATATGGTTGTTTCTCTAGATTTACTTTAAGT
TTTTCAGGGTTTTGGACAACGTTAATACTGAATATAATTGGTAGCTTCGTAGGTATCTTAGTTTTCTTTTCGGGATACAC
ATCAATATCTTGTGGCCTTCTTAATAGAGACGTTGAGGGAAAAACAGCTCTAGCTGGACCTCTAACTAACATAATAGTAG
GATTTGTTGGCCTTATTGGTGCATCGTTAGTGCCTTTTAGCCTTGTTGGCTTATTTTTCTTTGAATTAGCTAGGTTTAAC
TTCTGGGTAGCATTCTTTAACTTGCTTCCATTCTGGGTTTTAGACGGATTAAAGATCTTTAGATGGAACATGATAGTGTG
GGCAGTATTGATAATCATTGCATTCGCACTAACATTTCTATAA

Upstream 100 bases:

>100_bases
ATGACAAAAAAGCGTTATTATGGAAAATAGATAGTACAAACATTCGATATGTAAGCAATAATTTAATACCCTCAGAGTTG
TTAAGATTAATAAGATAGGT

Downstream 100 bases:

>100_bases
TGGTGAATAAAGTGATAATAAAAAAAATAATAGGTATATCAACTTTTTTCTTAATGTTTCTTGTTACTTTGGGTTTTATG
GTAGGTTTATTAGCAACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSWDIRYLEWRFANLNEITSFLLAALSLAVAYIRPTSILSDPIGSIIIPYIVALLAIIPHEIGHRQAARRYGCFSRFTLS
FSGFWTTLILNIIGSFVGILVFFSGYTSISCGLLNRDVEGKTALAGPLTNIIVGFVGLIGASLVPFSLVGLFFFELARFN
FWVAFFNLLPFWVLDGLKIFRWNMIVWAVLIIIAFALTFL

Sequences:

>Translated_200_residues
MSWDIRYLEWRFANLNEITSFLLAALSLAVAYIRPTSILSDPIGSIIIPYIVALLAIIPHEIGHRQAARRYGCFSRFTLS
FSGFWTTLILNIIGSFVGILVFFSGYTSISCGLLNRDVEGKTALAGPLTNIIVGFVGLIGASLVPFSLVGLFFFELARFN
FWVAFFNLLPFWVLDGLKIFRWNMIVWAVLIIIAFALTFL
>Mature_199_residues
SWDIRYLEWRFANLNEITSFLLAALSLAVAYIRPTSILSDPIGSIIIPYIVALLAIIPHEIGHRQAARRYGCFSRFTLSF
SGFWTTLILNIIGSFVGILVFFSGYTSISCGLLNRDVEGKTALAGPLTNIIVGFVGLIGASLVPFSLVGLFFFELARFNF
WVAFFNLLPFWVLDGLKIFRWNMIVWAVLIIIAFALTFL

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 22443; Mature: 22312

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWDIRYLEWRFANLNEITSFLLAALSLAVAYIRPTSILSDPIGSIIIPYIVALLAIIPH
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
EIGHRQAARRYGCFSRFTLSFSGFWTTLILNIIGSFVGILVFFSGYTSISCGLLNRDVEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
KTALAGPLTNIIVGFVGLIGASLVPFSLVGLFFFELARFNFWVAFFNLLPFWVLDGLKIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWNMIVWAVLIIIAFALTFL
HHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SWDIRYLEWRFANLNEITSFLLAALSLAVAYIRPTSILSDPIGSIIIPYIVALLAIIPH
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
EIGHRQAARRYGCFSRFTLSFSGFWTTLILNIIGSFVGILVFFSGYTSISCGLLNRDVEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
KTALAGPLTNIIVGFVGLIGASLVPFSLVGLFFFELARFNFWVAFFNLLPFWVLDGLKIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWNMIVWAVLIIIAFALTFL
HHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]