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The map label for this gene is 15897391

Identifier: 15897391

GI number: 15897391

Start: 397123

End: 397767

Strand: Reverse

Name: 15897391

Synonym: SSO0463

Alternate gene names: NA

Gene position: 397767-397123 (Counterclockwise)

Preceding gene: 15897392

Following gene: 15897390

Centisome position: 13.29

GC content: 28.99

Gene sequence:

>645_bases
ATGGAACATGATAGTGTGGGCAGTATTGATAATCATTGCATTCGCACTAACATTTCTATAATGGTGAATAAAGTGATAAT
AAAAAAAATAATAGGTATATCAACTTTTTTCTTAATGTTTCTTGTTACTTTGGGTTTTATGGTAGGTTTATTAGCAACTT
TTATAGATTCTACCTCATTATATTATCTAGAACAATTAAACTACTTAGTAATTAAAGGGTATTATTCCGAACTATTCACA
TCAATATTTATAACTAATAGCTTTGTTGATTTTATATTTAATTTTATTTCATTATATGTTATATATTTAATTTTTGGTAG
TAGAGCGGGAAAACATGAATATGGTATATTTATCCTAGCTGGTATTCTAGGAAATCTACTAACTGTAATATTCTATAGTC
CTTTTACACTAAGCTCGGGAGCGTCTGGGGGAATATTTGGATTATTAAGTTACTACACGTTTTACGATTTCTTAAAAAAG
GATAATCTAGGGGTTTATGGTCTTGTATTTTTAGTATCAGTATTTGGAGTTAGTGATTTAATATTCCCTAATGTGAACGT
TGTTGCTCATATCGGAGGTATTTTGGGAGGTATTATGTACGCAGTTGTCTATTACCTTATAAGGAGTGGAAGGACAATAA
AATAA

Upstream 100 bases:

>100_bases
TTGTTGGCTTATTTTTCTTTGAATTAGCTAGGTTTAACTTCTGGGTAGCATTCTTTAACTTGCTTCCATTCTGGGTTTTA
GACGGATTAAAGATCTTTAG

Downstream 100 bases:

>100_bases
TTATGATATTAGTAGAGGAAATACTATTAATTATAGGATTCTTAATGCTCCCATACGGTTTGTATGAAATTATCAAAAGT
GAGGCAGATAGAGCTGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MEHDSVGSIDNHCIRTNISIMVNKVIIKKIIGISTFFLMFLVTLGFMVGLLATFIDSTSLYYLEQLNYLVIKGYYSELFT
SIFITNSFVDFIFNFISLYVIYLIFGSRAGKHEYGIFILAGILGNLLTVIFYSPFTLSSGASGGIFGLLSYYTFYDFLKK
DNLGVYGLVFLVSVFGVSDLIFPNVNVVAHIGGILGGIMYAVVYYLIRSGRTIK

Sequences:

>Translated_214_residues
MEHDSVGSIDNHCIRTNISIMVNKVIIKKIIGISTFFLMFLVTLGFMVGLLATFIDSTSLYYLEQLNYLVIKGYYSELFT
SIFITNSFVDFIFNFISLYVIYLIFGSRAGKHEYGIFILAGILGNLLTVIFYSPFTLSSGASGGIFGLLSYYTFYDFLKK
DNLGVYGLVFLVSVFGVSDLIFPNVNVVAHIGGILGGIMYAVVYYLIRSGRTIK
>Mature_214_residues
MEHDSVGSIDNHCIRTNISIMVNKVIIKKIIGISTFFLMFLVTLGFMVGLLATFIDSTSLYYLEQLNYLVIKGYYSELFT
SIFITNSFVDFIFNFISLYVIYLIFGSRAGKHEYGIFILAGILGNLLTVIFYSPFTLSSGASGGIFGLLSYYTFYDFLKK
DNLGVYGLVFLVSVFGVSDLIFPNVNVVAHIGGILGGIMYAVVYYLIRSGRTIK

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23906; Mature: 23906

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHDSVGSIDNHCIRTNISIMVNKVIIKKIIGISTFFLMFLVTLGFMVGLLATFIDSTSL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YYLEQLNYLVIKGYYSELFTSIFITNSFVDFIFNFISLYVIYLIFGSRAGKHEYGIFILA
HHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
GILGNLLTVIFYSPFTLSSGASGGIFGLLSYYTFYDFLKKDNLGVYGLVFLVSVFGVSDL
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IFPNVNVVAHIGGILGGIMYAVVYYLIRSGRTIK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEHDSVGSIDNHCIRTNISIMVNKVIIKKIIGISTFFLMFLVTLGFMVGLLATFIDSTSL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YYLEQLNYLVIKGYYSELFTSIFITNSFVDFIFNFISLYVIYLIFGSRAGKHEYGIFILA
HHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
GILGNLLTVIFYSPFTLSSGASGGIFGLLSYYTFYDFLKKDNLGVYGLVFLVSVFGVSDL
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IFPNVNVVAHIGGILGGIMYAVVYYLIRSGRTIK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA