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The map label for this gene is 15897378

Identifier: 15897378

GI number: 15897378

Start: 387452

End: 388036

Strand: Direct

Name: 15897378

Synonym: SSO0447

Alternate gene names: NA

Gene position: 387452-388036 (Clockwise)

Preceding gene: 15897376

Following gene: 15897379

Centisome position: 12.95

GC content: 32.99

Gene sequence:

>585_bases
ATGCTGTTATACGTCGTAATAAAGACTCCTAATTTGCTTCAGTTTCCAGAATTTATTCCTAAAAAGGTTACAGTTAACAT
TCTGGATATAAGGGTTGATGGGGAGAAAGGTAAGCTACTTCTCGAGATACGTGGAGACGAAACCAGCGCTAAGCAAGTTT
GTGAAGAACCTATTAAAGTTTCAAAGTATAAATTTATCTGTACAAATTATATTTCAAGTGAGTTACTTAAGATTTTATCG
CAATATACTATAATGAATGGTGCTTTAACAGATGATGGAATTTTTTGGACTTTAATACTAAACGGTTATACAGAGCTTAG
GGAATTACTTAACTCGCTAATAGACATTACAAAAGAAGTTAGAGTTTTAAAAGTTGTGAAAGCTGAAAAGAAAGATGCAA
TAACTGCAAGGCAGGAGCAAATACTAAGGATTGCATTAGAAGCTGGATTTTTCGACTATCCTAGAAGAATAGGATTAAAA
GATCTGGCTAAAAAGTTAAACATCAGTCCATCTAGTCTAAGTGAAATTATAAGAAGAGCTGAAAAGAACGTAATTACAGC
TTATTTTGAAGAGAGGGAACTATGA

Upstream 100 bases:

>100_bases
GAGCCTCGTAGTTAATGAAAGGTGAATGAAGGTCTTGAGTGCTGAATTTTAATTGTTAGTAGATAAGTTTAAGTAGTATA
AGTTTAGAGGTAATTATGTA

Downstream 100 bases:

>100_bases
AACATGGAGGATACCCTTGGAAAAATGGAAAACCAGCTTTAGACGTTAAAGATTTTAGCGTGAATCTTAATCCTATGGGT
GTACCTAAGTTCATTGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: HTH Domain-Containing Protein; Bacterio-Opsin Activator

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MLLYVVIKTPNLLQFPEFIPKKVTVNILDIRVDGEKGKLLLEIRGDETSAKQVCEEPIKVSKYKFICTNYISSELLKILS
QYTIMNGALTDDGIFWTLILNGYTELRELLNSLIDITKEVRVLKVVKAEKKDAITARQEQILRIALEAGFFDYPRRIGLK
DLAKKLNISPSSLSEIIRRAEKNVITAYFEEREL

Sequences:

>Translated_194_residues
MLLYVVIKTPNLLQFPEFIPKKVTVNILDIRVDGEKGKLLLEIRGDETSAKQVCEEPIKVSKYKFICTNYISSELLKILS
QYTIMNGALTDDGIFWTLILNGYTELRELLNSLIDITKEVRVLKVVKAEKKDAITARQEQILRIALEAGFFDYPRRIGLK
DLAKKLNISPSSLSEIIRRAEKNVITAYFEEREL
>Mature_194_residues
MLLYVVIKTPNLLQFPEFIPKKVTVNILDIRVDGEKGKLLLEIRGDETSAKQVCEEPIKVSKYKFICTNYISSELLKILS
QYTIMNGALTDDGIFWTLILNGYTELRELLNSLIDITKEVRVLKVVKAEKKDAITARQEQILRIALEAGFFDYPRRIGLK
DLAKKLNISPSSLSEIIRRAEKNVITAYFEEREL

Specific function: Unknown

COG id: COG3413

COG function: function code R; Predicted DNA binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22266; Mature: 22266

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLYVVIKTPNLLQFPEFIPKKVTVNILDIRVDGEKGKLLLEIRGDETSAKQVCEEPIKV
CEEEEEECCCCCCCCHHHCCCCEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHCCHHH
SKYKFICTNYISSELLKILSQYTIMNGALTDDGIFWTLILNGYTELRELLNSLIDITKEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
RVLKVVKAEKKDAITARQEQILRIALEAGFFDYPRRIGLKDLAKKLNISPSSLSEIIRRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHCCCCHHHHHHHHHHH
EKNVITAYFEEREL
HHHHEEEHHHCCCC
>Mature Secondary Structure
MLLYVVIKTPNLLQFPEFIPKKVTVNILDIRVDGEKGKLLLEIRGDETSAKQVCEEPIKV
CEEEEEECCCCCCCCHHHCCCCEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHCCHHH
SKYKFICTNYISSELLKILSQYTIMNGALTDDGIFWTLILNGYTELRELLNSLIDITKEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
RVLKVVKAEKKDAITARQEQILRIALEAGFFDYPRRIGLKDLAKKLNISPSSLSEIIRRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHCCCCHHHHHHHHHHH
EKNVITAYFEEREL
HHHHEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA