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The map label for this gene is rps15p

Identifier: 15897342

GI number: 15897342

Start: 357792

End: 358250

Strand: Direct

Name: rps15p

Synonym: SSO0408

Alternate gene names: 15897342

Gene position: 357792-358250 (Clockwise)

Preceding gene: 15897341

Following gene: 15897344

Centisome position: 11.96

GC content: 37.69

Gene sequence:

>459_bases
ATGAACAAGAGGAGGGCTAAAGGTAAATCGCATTCCATAAGGCCTGCTAGAGCTGGAGCACCTAAATGGGTAAGGTTAAC
CAGAGAAGAAGTTGAAATGCTAGTTGAAGAATTGGCAAAAAGAGGTTATACTCCATCAATGATAGGGATAATATTAAGAG
ATCAATATGGGATTCCTTTAGTTAAACAAATAGTCGGGAAAAAGGTTACTCAAATACTGGAAGAAAGAGGTTTAGCTCCT
CAAATACCTGAAGATCTTTTCAATCTGATAAGGAAGGCAGTAAATGTAAGGAGGCATATCAATGAATATCCACGTGATAA
AACAGCAAAGAAAGGATTAGAAGAGATTGAATCAAAAATCAGGCGTTTAACTAGGTATTATAAAGGTATTGGAAAACTAC
CACAAGAATGGGTTTACGATCCTGCAAAGGCCGAGCTATTAGTAGCTGGTGCAAGTTAG

Upstream 100 bases:

>100_bases
AGAAACTAGTATCCATGGTAGAGGGAACAAAGGTTGTCAGAGAAGAACTTAAAAGGAAAGGATATAGTGTAGATTAAAGG
TAGTAATTTGGTGAACGCAG

Downstream 100 bases:

>100_bases
TAGTTTTTGTTGTAAGTTTCGTTTACTCTTTTAACCAATACCTCTCCTATTTTCTCATCAAATCCTAATGGATCAGCTAT
TGTTATTTCAATTTCTCTTC

Product: 30S ribosomal protein S15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MNKRRAKGKSHSIRPARAGAPKWVRLTREEVEMLVEELAKRGYTPSMIGIILRDQYGIPLVKQIVGKKVTQILEERGLAP
QIPEDLFNLIRKAVNVRRHINEYPRDKTAKKGLEEIESKIRRLTRYYKGIGKLPQEWVYDPAKAELLVAGAS

Sequences:

>Translated_152_residues
MNKRRAKGKSHSIRPARAGAPKWVRLTREEVEMLVEELAKRGYTPSMIGIILRDQYGIPLVKQIVGKKVTQILEERGLAP
QIPEDLFNLIRKAVNVRRHINEYPRDKTAKKGLEEIESKIRRLTRYYKGIGKLPQEWVYDPAKAELLVAGAS
>Mature_152_residues
MNKRRAKGKSHSIRPARAGAPKWVRLTREEVEMLVEELAKRGYTPSMIGIILRDQYGIPLVKQIVGKKVTQILEERGLAP
QIPEDLFNLIRKAVNVRRHINEYPRDKTAKKGLEEIESKIRRLTRYYKGIGKLPQEWVYDPAKAELLVAGAS

Specific function: Unknown

COG id: COG0184

COG function: function code J; Ribosomal protein S15P/S13E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S15P family

Homologues:

Organism=Homo sapiens, GI4506685, Length=144, Percent_Identity=47.9166666666667, Blast_Score=137, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI17554774, Length=144, Percent_Identity=41.6666666666667, Blast_Score=124, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6320269, Length=142, Percent_Identity=46.4788732394366, Blast_Score=130, Evalue=9e-32,
Organism=Drosophila melanogaster, GI85724904, Length=144, Percent_Identity=43.75, Blast_Score=126, Evalue=6e-30,
Organism=Drosophila melanogaster, GI17136832, Length=144, Percent_Identity=43.75, Blast_Score=126, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS15_SULSO (Q980A8)

Other databases:

- EMBL:   AE006641
- PIR:   B90185
- RefSeq:   NP_341947.1
- ProteinModelPortal:   Q980A8
- GeneID:   1455547
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO0408
- NMPDR:   fig|273057.1.peg.370
- HOGENOM:   HBG747651
- OMA:   IRRLVKY
- PhylomeDB:   Q980A8
- ProtClustDB:   PRK08561
- BioCyc:   SSOL273057:SSO0408-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01343_A
- InterPro:   IPR012606
- InterPro:   IPR000589
- InterPro:   IPR023029
- InterPro:   IPR009068

Pfam domain/function: PF08069 Ribosomal_S13_N; PF00312 Ribosomal_S15; SSF47060 S15/NS1_bind

EC number: NA

Molecular weight: Translated: 17442; Mature: 17442

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS00362 RIBOSOMAL_S15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRRAKGKSHSIRPARAGAPKWVRLTREEVEMLVEELAKRGYTPSMIGIILRDQYGIPL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH
VKQIVGKKVTQILEERGLAPQIPEDLFNLIRKAVNVRRHINEYPRDKTAKKGLEEIESKI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RRLTRYYKGIGKLPQEWVYDPAKAELLVAGAS
HHHHHHHHHHCCCCHHHCCCCCHHHEEECCCC
>Mature Secondary Structure
MNKRRAKGKSHSIRPARAGAPKWVRLTREEVEMLVEELAKRGYTPSMIGIILRDQYGIPL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH
VKQIVGKKVTQILEERGLAPQIPEDLFNLIRKAVNVRRHINEYPRDKTAKKGLEEIESKI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RRLTRYYKGIGKLPQEWVYDPAKAELLVAGAS
HHHHHHHHHHCCCCHHHCCCCCHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726