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The map label for this gene is rps6E [H]

Identifier: 15897344

GI number: 15897344

Start: 358711

End: 359355

Strand: Direct

Name: rps6E [H]

Synonym: SSO0411

Alternate gene names: 15897344

Gene position: 358711-359355 (Clockwise)

Preceding gene: 15897342

Following gene: 15897345

Centisome position: 11.99

GC content: 35.5

Gene sequence:

>645_bases
ATGCCGGACTTCAAAATTGTCATTTCAGATCCACAATCTGTAGAGCCTAAAAGAATAAAGGTCAAAGTAAAGGCAAGTGA
TCAAGTTAAATCAATTACTGGGGAAAAAGATGGAAAAGCGGTACCACAAGCTAAGGTTAATGAAAAAACTAAACAATTAT
TAAATGTTGATACGCTTTTAACATTAGAAATAACCAAACAAGAAGGCGATAAAAAGGTAAAGGTAAAAGGTCATTTTAAG
GTAGATGTAGATAACAGTGTACCAGATAACGAAGTATGGATAAGTAAAACAATGGCGGAGAAATTTGGAGCTGAGGATTT
TGAAGCCTTTGCATATAGGACTAAGACGCTACAAATAAGTGTTGATCAAAACAAGGCAACGAATCTAGTCGGTCTAAAAA
TAGGCGATGTATTCGAAGCTAATCAACTAATTGGGTTACCAGTTAAGTTGAAGATAACTGGAGGATCGGATAATTCAGGG
TTCCCAATGCGATTTGATGTTATTGGGGCAGCTAAGCGTAAAATATTACTAAGTGGGCCTCCTGGATTTTACCCGAATGA
AAATGGAGAAAGAAGAAGAAAAACTATACGAGGAAATACAATTAGCCAGGAAATAGTTCAAATTAATACCATAATAGTAA
GGTGA

Upstream 100 bases:

>100_bases
AAAACTAACAAAACTCCTAGCACCGCTGTTCACATAGCTTATGGTAATGCGATTTTATATATTTGTTTTAAGTATACCAC
ACAAAAGGTGGCATTGTTAA

Downstream 100 bases:

>100_bases
AGTAGTTTTTGGCATGGCCTAAAGTTCAACCAGAAGTTAATATAGGTGTAGTTGGTCATGTAGATCATGGTAAGACTACA
CTAGTTCAAGCAATAACGGG

Product: 30S ribosomal protein S6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MPDFKIVISDPQSVEPKRIKVKVKASDQVKSITGEKDGKAVPQAKVNEKTKQLLNVDTLLTLEITKQEGDKKVKVKGHFK
VDVDNSVPDNEVWISKTMAEKFGAEDFEAFAYRTKTLQISVDQNKATNLVGLKIGDVFEANQLIGLPVKLKITGGSDNSG
FPMRFDVIGAAKRKILLSGPPGFYPNENGERRRKTIRGNTISQEIVQINTIIVR

Sequences:

>Translated_214_residues
MPDFKIVISDPQSVEPKRIKVKVKASDQVKSITGEKDGKAVPQAKVNEKTKQLLNVDTLLTLEITKQEGDKKVKVKGHFK
VDVDNSVPDNEVWISKTMAEKFGAEDFEAFAYRTKTLQISVDQNKATNLVGLKIGDVFEANQLIGLPVKLKITGGSDNSG
FPMRFDVIGAAKRKILLSGPPGFYPNENGERRRKTIRGNTISQEIVQINTIIVR
>Mature_213_residues
PDFKIVISDPQSVEPKRIKVKVKASDQVKSITGEKDGKAVPQAKVNEKTKQLLNVDTLLTLEITKQEGDKKVKVKGHFKV
DVDNSVPDNEVWISKTMAEKFGAEDFEAFAYRTKTLQISVDQNKATNLVGLKIGDVFEANQLIGLPVKLKITGGSDNSGF
PMRFDVIGAAKRKILLSGPPGFYPNENGERRRKTIRGNTISQEIVQINTIIVR

Specific function: Unknown

COG id: COG2125

COG function: function code J; Ribosomal protein S6E (S10)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S6e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001377
- InterPro:   IPR020924
- InterPro:   IPR018282 [H]

Pfam domain/function: PF01092 Ribosomal_S6e [H]

EC number: NA

Molecular weight: Translated: 23721; Mature: 23589

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS00578 RIBOSOMAL_S6E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFKIVISDPQSVEPKRIKVKVKASDQVKSITGEKDGKAVPQAKVNEKTKQLLNVDTLL
CCCEEEEECCCCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCCCHHCHHHHHHHCCCEEE
TLEITKQEGDKKVKVKGHFKVDVDNSVPDNEVWISKTMAEKFGAEDFEAFAYRTKTLQIS
EEEEECCCCCEEEEEEEEEEEEECCCCCCCCEEEEHHHHHHCCCCCHHHHEEEEEEEEEE
VDQNKATNLVGLKIGDVFEANQLIGLPVKLKITGGSDNSGFPMRFDVIGAAKRKILLSGP
ECCCCCCEEEEEEECCEECCCCEECCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEECC
PGFYPNENGERRRKTIRGNTISQEIVQINTIIVR
CCCCCCCCCHHHHHHHCCCCHHHHEEEEEEEEEC
>Mature Secondary Structure 
PDFKIVISDPQSVEPKRIKVKVKASDQVKSITGEKDGKAVPQAKVNEKTKQLLNVDTLL
CCEEEEECCCCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCCCHHCHHHHHHHCCCEEE
TLEITKQEGDKKVKVKGHFKVDVDNSVPDNEVWISKTMAEKFGAEDFEAFAYRTKTLQIS
EEEEECCCCCEEEEEEEEEEEEECCCCCCCCEEEEHHHHHHCCCCCHHHHEEEEEEEEEE
VDQNKATNLVGLKIGDVFEANQLIGLPVKLKITGGSDNSGFPMRFDVIGAAKRKILLSGP
ECCCCCCEEEEEEECCEECCCCEECCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEECC
PGFYPNENGERRRKTIRGNTISQEIVQINTIIVR
CCCCCCCCCHHHHHHHCCCCHHHHEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA