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The map label for this gene is ribA [H]

Identifier: 15897336

GI number: 15897336

Start: 352123

End: 352782

Strand: Reverse

Name: ribA [H]

Synonym: SSO0402

Alternate gene names: 15897336

Gene position: 352782-352123 (Counterclockwise)

Preceding gene: 15897338

Following gene: 15897335

Centisome position: 11.79

GC content: 34.85

Gene sequence:

>660_bases
ATGGATTTTCTCAGTTTACGTAAAGATCTAGAATCTGGAATACCGATATTAATATATGATTTTGATGGAAGGGAAGAAGA
AACTGACATGGTATTTTACGCGGGAGCAATAAGCTGGAAAAGCATATATACTCTAAGGAAAGAAGCAGGGGGATTAATAT
GCTACGCAACAGCAATTAACGAAGCTAAAACATTAGGTCTGAATTTTATAGCAGAAGAGTTAAAACAACACGAAACATAC
AGTAAACTAGTAAAGAAGCCTTCTTATGGAGATTACCCAGCATTTTCCGTGTGGGTTAATCATGTTAATACAAAAACTGG
AATCTCTGACTATGATAGATATATTACTATAAGCGAATTACATAAAATAATACTCAAAACTAAAACAAATCCAGAAGAGG
CAAGAAGGGAATTTTATGAGAACTTCATGACACCAGGTCATGTACCTATACTCATTGCAAGGGATATAAGAGAGAGAAGG
GGCCATACTGAATTATCAATAACATTGTTACAAAAACTAGGATTAGAAAGAAGTGCGGTAATAGCAGAGATACTAGACGA
GAAGTCCAGCATGAATAAAGATAAGGCAAAAATGATTGCAAAGAACTTCGGGCTTCACTTTATAGAGGGAAAAGACATCT
TTAAAGAGGTGATCATATGA

Upstream 100 bases:

>100_bases
TATATTTCTGTTGGATCAATAATTTACCCGTTTAAATAAATATTGTACTTAGATATGAGTAAATACTTTTTTATACTATT
GCAGTTCTGATATTCTTGGT

Downstream 100 bases:

>100_bases
CGAGAAAATATGGAATAGCGGATACTACATTTTCAAGAGTAGATATGGGAAGTCTAGTATACAAGGTAATAAGAAGCGAA
GACAGTGAAGCGGATATCGT

Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase

Products: NA

Alternate protein names: DHBP synthase [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDFLSLRKDLESGIPILIYDFDGREEETDMVFYAGAISWKSIYTLRKEAGGLICYATAINEAKTLGLNFIAEELKQHETY
SKLVKKPSYGDYPAFSVWVNHVNTKTGISDYDRYITISELHKIILKTKTNPEEARREFYENFMTPGHVPILIARDIRERR
GHTELSITLLQKLGLERSAVIAEILDEKSSMNKDKAKMIAKNFGLHFIEGKDIFKEVII

Sequences:

>Translated_219_residues
MDFLSLRKDLESGIPILIYDFDGREEETDMVFYAGAISWKSIYTLRKEAGGLICYATAINEAKTLGLNFIAEELKQHETY
SKLVKKPSYGDYPAFSVWVNHVNTKTGISDYDRYITISELHKIILKTKTNPEEARREFYENFMTPGHVPILIARDIRERR
GHTELSITLLQKLGLERSAVIAEILDEKSSMNKDKAKMIAKNFGLHFIEGKDIFKEVII
>Mature_219_residues
MDFLSLRKDLESGIPILIYDFDGREEETDMVFYAGAISWKSIYTLRKEAGGLICYATAINEAKTLGLNFIAEELKQHETY
SKLVKKPSYGDYPAFSVWVNHVNTKTGISDYDRYITISELHKIILKTKTNPEEARREFYENFMTPGHVPILIARDIRERR
GHTELSITLLQKLGLERSAVIAEILDEKSSMNKDKAKMIAKNFGLHFIEGKDIFKEVII

Specific function: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate [H]

COG id: COG0108

COG function: function code H; 3,4-dihydroxy-2-butanone 4-phosphate synthase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHBP synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR000422 [H]

Pfam domain/function: PF00926 DHBP_synthase [H]

EC number: =4.1.99.12 [H]

Molecular weight: Translated: 25157; Mature: 25157

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLSLRKDLESGIPILIYDFDGREEETDMVFYAGAISWKSIYTLRKEAGGLICYATAIN
CCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEHHC
EAKTLGLNFIAEELKQHETYSKLVKKPSYGDYPAFSVWVNHVNTKTGISDYDRYITISEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHEEEHHHH
HKIILKTKTNPEEARREFYENFMTPGHVPILIARDIRERRGHTELSITLLQKLGLERSAV
HHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHCCCHHHH
IAEILDEKSSMNKDKAKMIAKNFGLHFIEGKDIFKEVII
HHHHHHHHHCCCHHHHHHHHHHCCEEEECCHHHHHHHCC
>Mature Secondary Structure
MDFLSLRKDLESGIPILIYDFDGREEETDMVFYAGAISWKSIYTLRKEAGGLICYATAIN
CCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEHHC
EAKTLGLNFIAEELKQHETYSKLVKKPSYGDYPAFSVWVNHVNTKTGISDYDRYITISEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHEEEHHHH
HKIILKTKTNPEEARREFYENFMTPGHVPILIARDIRERRGHTELSITLLQKLGLERSAV
HHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHCCCHHHH
IAEILDEKSSMNKDKAKMIAKNFGLHFIEGKDIFKEVII
HHHHHHHHHCCCHHHHHHHHHHCCEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]