Click here to switch to the map view.

The map label for this gene is secE

Identifier: 15897282

GI number: 15897282

Start: 297579

End: 297767

Strand: Reverse

Name: secE

Synonym: SSO5663

Alternate gene names: 15897282

Gene position: 297767-297579 (Counterclockwise)

Preceding gene: 60620671

Following gene: 15897281

Centisome position: 9.95

GC content: 34.39

Gene sequence:

>189_bases
GTGAGTTCAAATAAGATAATTAACTGGTTCAGAAGGCTTAGAGAGGATTGGAATAGAATAATTACAGTAGCGAGGAAACC
GGATAGAAACTTTTTCTCACTTAACCTTAAAGTTACTTTACTAGTATTAGCCGTAGTAGGTGTATTAGCTTACATAATTC
AACTTGCGTTGACATTAATTGGGGTGTAA

Upstream 100 bases:

>100_bases
ATAGGTCAGGCTTATGATGATCTAATTCCATTTAATGCCGAATGGTTCATTCAGAGATTATTCAGTTAACTTAAATACCT
TAAACCAATTATAAATTACT

Downstream 100 bases:

>100_bases
TTTTGTGGAAAAACCGAATATGAGAAACTATTATGCTATAAAGGTGGTTGGAGGGCAAGAAATAAATGTAGCTTTAATGC
TGGAAGAAAGAATAAAAACT

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: Protein transport protein Sec61 gamma subunit homolog

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MSSNKIINWFRRLREDWNRIITVARKPDRNFFSLNLKVTLLVLAVVGVLAYIIQLALTLIGV

Sequences:

>Translated_62_residues
MSSNKIINWFRRLREDWNRIITVARKPDRNFFSLNLKVTLLVLAVVGVLAYIIQLALTLIGV
>Mature_61_residues
SSNKIINWFRRLREDWNRIITVARKPDRNFFSLNLKVTLLVLAVVGVLAYIIQLALTLIGV

Specific function: Involved in protein export

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECE_SULSO (P58191)

Other databases:

- EMBL:   AE006641
- PIR:   F90177
- RefSeq:   NP_341887.1
- ProteinModelPortal:   P58191
- SMR:   P58191
- GeneID:   1455487
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO5663
- NMPDR:   fig|273057.1.peg.310
- HOGENOM:   HBG705507
- OMA:   DWKRIIS
- ProtClustDB:   PRK09400
- BioCyc:   SSOL273057:SSO5663-MONOMER
- HAMAP:   MF_00422
- InterPro:   IPR022943
- InterPro:   IPR008158
- TIGRFAMs:   TIGR00327

Pfam domain/function: SSF103456 SecE_euk_arc

EC number: NA

Molecular weight: Translated: 7184; Mature: 7053

Theoretical pI: Translated: 11.91; Mature: 11.91

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbf302a4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNKIINWFRRLREDWNRIITVARKPDRNFFSLNLKVTLLVLAVVGVLAYIIQLALTLI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
GV
CH
>Mature Secondary Structure 
SSNKIINWFRRLREDWNRIITVARKPDRNFFSLNLKVTLLVLAVVGVLAYIIQLALTLI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
GV
CH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11427726