| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
Click here to switch to the map view.
The map label for this gene is tyrA [H]
Identifier: 15897245
GI number: 15897245
Start: 257014
End: 258054
Strand: Direct
Name: tyrA [H]
Synonym: SSO0302
Alternate gene names: 15897245
Gene position: 257014-258054 (Clockwise)
Preceding gene: 15897244
Following gene: 15897246
Centisome position: 8.59
GC content: 31.22
Gene sequence:
>1041_bases ATGACTGAAGAAATAACACGGCTGAGGGAAGAAATAGATAAGGTAGACGAGCAGTTAGTAAAGTTACTCTCATATAGATT AGAATTATCTAGAAAAATAGGGAAAGCTAAGTCGAATTCTAATATAAGTGTTACTGACGAGAATAGGGAAATGAAAGTTA GAGAAAAATGGATTGCTAACGCAAAAAAGTATAATATTCCAAATAGTCTGGTTGAATCTATATTGCCTTTGATTTTTTCT TATTCTAAACTAGTTCAGATTAACCCAGGAGAGAAAGAAAGAGTAGTAATATATGGATATGGCGGAATGGCTAAATCGAT CGTTTCTATTCTTTCATTAGCTGGGCATGAAGTATCGATTACTGGAAGAGATTTAAGTAAAGCGGAGATGTTAGCTAATC AATTTAAATGTGTAAGTATGTCCTTATTAAAAGCAATAGATTGGGGGGATATAATTATATTTGCAATACCTCCTAGTGCA ATATTAAATAATTCCGATGAATTATTTTCAAAGGCACTTAAAGATAAGATTGTTATGGATATTAGTTCTTCTAAATTTAA AATATTTGGCTTCCTAGAAGAATTATCTAGGAAACTAGAGTTTAGGTATATTTCTACACATCCACTTTTCGGTCCTATTG AATACCCTATTGGAGAGAGAGTTGTAATTATACCTTCCAAAACTAGTTCTAATGATGATGTCATGAAGGTGGAGAATTTC TGGAGGAAAAGTGGTTTAGTACCCGTCATAACTGATGTTGAAACTCATGAAAAAGCAATGGCTATTGTTCAAGTTCTAAC GCATTATTATCTTCTGGGTTTATCAAACGCAATTGATACTTTATCGTTAGAGTTAGGTGTAGATTACAGTAATTTCCATA CTACAAACTTTAGAGAATTAAACAAGATTTTAAAGCGGGTTAAAGATCTAAAAAATGTAATTACTGAAATACAAAATCAA AACCCTTATTCTTATAAAGTTAGAAATATAGGTTTAGAGGAGCTTAAAAAAATTAAAGAAGAATTAGAAGGAGGTAAATA G
Upstream 100 bases:
>100_bases GACTTTTGGAAGATCTGCTAGAAGCCAAAGGGATCTACTAGATTACTATAATATAAACTATAAAACAATTATAAGGGAGG CAATTGATTTATTGAAGTAG
Downstream 100 bases:
>100_bases AATGATCTTATATGTCCTTAAGGATAGAGCTGATTACTCTATACTAATAGAAAAGCTAAATGAAAACTCAGCATCTTTCA AGATATTAAACCTATATGGT
Product: chorismate mutase/prephenate dehydratase, putative (tyrA)
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTEEITRLREEIDKVDEQLVKLLSYRLELSRKIGKAKSNSNISVTDENREMKVREKWIANAKKYNIPNSLVESILPLIFS YSKLVQINPGEKERVVIYGYGGMAKSIVSILSLAGHEVSITGRDLSKAEMLANQFKCVSMSLLKAIDWGDIIIFAIPPSA ILNNSDELFSKALKDKIVMDISSSKFKIFGFLEELSRKLEFRYISTHPLFGPIEYPIGERVVIIPSKTSSNDDVMKVENF WRKSGLVPVITDVETHEKAMAIVQVLTHYYLLGLSNAIDTLSLELGVDYSNFHTTNFRELNKILKRVKDLKNVITEIQNQ NPYSYKVRNIGLEELKKIKEELEGGK
Sequences:
>Translated_346_residues MTEEITRLREEIDKVDEQLVKLLSYRLELSRKIGKAKSNSNISVTDENREMKVREKWIANAKKYNIPNSLVESILPLIFS YSKLVQINPGEKERVVIYGYGGMAKSIVSILSLAGHEVSITGRDLSKAEMLANQFKCVSMSLLKAIDWGDIIIFAIPPSA ILNNSDELFSKALKDKIVMDISSSKFKIFGFLEELSRKLEFRYISTHPLFGPIEYPIGERVVIIPSKTSSNDDVMKVENF WRKSGLVPVITDVETHEKAMAIVQVLTHYYLLGLSNAIDTLSLELGVDYSNFHTTNFRELNKILKRVKDLKNVITEIQNQ NPYSYKVRNIGLEELKKIKEELEGGK >Mature_345_residues TEEITRLREEIDKVDEQLVKLLSYRLELSRKIGKAKSNSNISVTDENREMKVREKWIANAKKYNIPNSLVESILPLIFSY SKLVQINPGEKERVVIYGYGGMAKSIVSILSLAGHEVSITGRDLSKAEMLANQFKCVSMSLLKAIDWGDIIIFAIPPSAI LNNSDELFSKALKDKIVMDISSSKFKIFGFLEELSRKLEFRYISTHPLFGPIEYPIGERVVIIPSKTSSNDDVMKVENFW RKSGLVPVITDVETHEKAMAIVQVLTHYYLLGLSNAIDTLSLELGVDYSNFHTTNFRELNKILKRVKDLKNVITEIQNQN PYSYKVRNIGLEELKKIKEELEGGK
Specific function: Tyrosine biosynthesis [C]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
Organism=Escherichia coli, GI1788952, Length=294, Percent_Identity=26.530612244898, Blast_Score=82, Evalue=6e-17,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR008244 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR011277 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01817 CM_2; PF02153 PDH [H]
EC number: =5.4.99.5; =1.3.1.12 [H]
Molecular weight: Translated: 39380; Mature: 39249
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEITRLREEIDKVDEQLVKLLSYRLELSRKIGKAKSNSNISVTDENREMKVREKWIAN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCC AKKYNIPNSLVESILPLIFSYSKLVQINPGEKERVVIYGYGGMAKSIVSILSLAGHEVSI CCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEE TGRDLSKAEMLANQFKCVSMSLLKAIDWGDIIIFAIPPSAILNNSDELFSKALKDKIVMD ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHEEEE ISSSKFKIFGFLEELSRKLEFRYISTHPLFGPIEYPIGERVVIIPSKTSSNDDVMKVENF CCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH WRKSGLVPVITDVETHEKAMAIVQVLTHYYLLGLSNAIDTLSLELGVDYSNFHTTNFREL HHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHH NKILKRVKDLKNVITEIQNQNPYSYKVRNIGLEELKKIKEELEGGK HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TEEITRLREEIDKVDEQLVKLLSYRLELSRKIGKAKSNSNISVTDENREMKVREKWIAN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCC AKKYNIPNSLVESILPLIFSYSKLVQINPGEKERVVIYGYGGMAKSIVSILSLAGHEVSI CCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEE TGRDLSKAEMLANQFKCVSMSLLKAIDWGDIIIFAIPPSAILNNSDELFSKALKDKIVMD ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHEEEE ISSSKFKIFGFLEELSRKLEFRYISTHPLFGPIEYPIGERVVIIPSKTSSNDDVMKVENF CCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH WRKSGLVPVITDVETHEKAMAIVQVLTHYYLLGLSNAIDTLSLELGVDYSNFHTTNFREL HHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHH NKILKRVKDLKNVITEIQNQNPYSYKVRNIGLEELKKIKEELEGGK HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6396419; 9205837; 9278503 [H]