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The map label for this gene is srp19

Identifier: 15897115

GI number: 15897115

Start: 136780

End: 137088

Strand: Direct

Name: srp19

Synonym: SSO0165

Alternate gene names: 15897115

Gene position: 136780-137088 (Clockwise)

Preceding gene: 15897114

Following gene: 15897116

Centisome position: 4.57

GC content: 31.39

Gene sequence:

>309_bases
ATGAGTCTCAGAGATCTTAAAGAAGAAAACAGAATAGTTATCTGGCCTTCATATTTTTTCTCACCAACTAGGTCTAAGGG
AAGACGGCTGGCTAGGATACCGTATAAAATAAAAACCGAAGAATTAGTTTCAACACTTAGGGAACTTGGTCTAGATCCGA
TAGTTATAGAAAATAAAAAATATCCTAGAGATAGAAAGATTAATTTTTTGATAGCGGTAAAGAAAGTTAAAAGTAAAAAT
TACACGTTAAAAATAATACACAACGCACTTATGGGAACGAGACAAACTAATCCTAATAAAAGTAATTAA

Upstream 100 bases:

>100_bases
ATAATAATAAGAGGAGCTAAAATTAGGACTGAGGCAGGATTAGCTGTAGTTACGTCTAGACCAGGACAAGATGGAGTAAT
AAATGCGGTGCTCTTAAAGA

Downstream 100 bases:

>100_bases
GAACATCAAGTTTAATAAAGGAATCCATTTCCATTACATATGTACATAGTTACAGGTGGTGCTGGTTACATAGGTGGACA
TCTAGTCGATTATTTAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: SRP19

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MSLRDLKEENRIVIWPSYFFSPTRSKGRRLARIPYKIKTEELVSTLRELGLDPIVIENKKYPRDRKINFLIAVKKVKSKN
YTLKIIHNALMGTRQTNPNKSN

Sequences:

>Translated_102_residues
MSLRDLKEENRIVIWPSYFFSPTRSKGRRLARIPYKIKTEELVSTLRELGLDPIVIENKKYPRDRKINFLIAVKKVKSKN
YTLKIIHNALMGTRQTNPNKSN
>Mature_101_residues
SLRDLKEENRIVIWPSYFFSPTRSKGRRLARIPYKIKTEELVSTLRELGLDPIVIENKKYPRDRKINFLIAVKKVKSKNY
TLKIIHNALMGTRQTNPNKSN

Specific function: Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP

COG id: COG1400

COG function: function code U; Signal recognition particle 19 kDa protein

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SRP19 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SRP19_SULSO (Q980W2)

Other databases:

- EMBL:   AE006641
- PIR:   G90156
- RefSeq:   NP_341720.1
- PDB:   3KTW
- PDBsum:   3KTW
- ProteinModelPortal:   Q980W2
- SMR:   Q980W2
- GeneID:   1453337
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO0165
- NMPDR:   fig|273057.1.peg.143
- HOGENOM:   HBG629394
- OMA:   WLAYFIA
- ProtClustDB:   CLSK802589
- BioCyc:   SSOL273057:SSO0165-MONOMER
- HAMAP:   MF_00305
- InterPro:   IPR002778
- InterPro:   IPR022938
- Gene3D:   G3DSA:3.30.56.30

Pfam domain/function: PF01922 SRP19; SSF69695 Signal_recog_particle_SRP19

EC number: NA

Molecular weight: Translated: 12029; Mature: 11898

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRDLKEENRIVIWPSYFFSPTRSKGRRLARIPYKIKTEELVSTLRELGLDPIVIENKK
CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCEECHHHHHHHHHHCCCCCEEECCCC
YPRDRKINFLIAVKKVKSKNYTLKIIHNALMGTRQTNPNKSN
CCCCCCEEEEEEEEEECCCCCEEEEEEHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLRDLKEENRIVIWPSYFFSPTRSKGRRLARIPYKIKTEELVSTLRELGLDPIVIENKK
CCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCEECHHHHHHHHHHCCCCCEEECCCC
YPRDRKINFLIAVKKVKSKNYTLKIIHNALMGTRQTNPNKSN
CCCCCCEEEEEEEEEECCCCCEEEEEEHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726