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The map label for this gene is 15897098

Identifier: 15897098

GI number: 15897098

Start: 121317

End: 122189

Strand: Reverse

Name: 15897098

Synonym: SSO0143

Alternate gene names: NA

Gene position: 122189-121317 (Counterclockwise)

Preceding gene: 15897101

Following gene: 15897097

Centisome position: 4.08

GC content: 39.86

Gene sequence:

>873_bases
TTGAACCCAGGATCTTCGCCGTGTGAGGGCTCTAAAAAGGGAGTTGAAAGGTGCAAAATGACTCTTGTTGCCATTTTACG
ACAGTATAGTGCTGACTACGCCCAAGAATTTTACGACTATTTGCTGAATGAAAGGAAAATTGGCAATAAAACGGCAAAAG
AGTATGTTAGTGCGGTAAATAGACCGTACAAAGAGACCGATAAATCGCAAAAGGCATACCGCATTTTTGCAAAGTTCTTA
GAATCACGCGGTGTAATTTCTTCTGAAGAAATGGAAAAGATTTTACGCGTCATAAAGGTGAAGAGAAGTAATGCTGATTT
ATACATTCCTACGGAAGAGGGGATTAGGAAAACGCTGAAGTTGGCGAAAGAGTACAGTGAAAATGTATATTTCGTCTATA
GGATAGCGTTGGAGAGCGGTGCCAGGTTGAATGAAATTTTGAAAGTATTGAAAAAGCCTGAGAAAGATGTATGCGATAGT
GCTGATGATAGTAATGGTAGAATTAGAAGTAATGGTAGTGCTGATGGTGGTATCAGTTTATGTTATTATCCCCTTAGTTG
GATTAGGGGGAGTAAAGGATCTTTTTACGTTTTTCACTTTTCCCCACTTCGAAAGGTAACAATAGGTGAAGGTGCTATAG
CTGGCTTTGAGAGAAGAAGGGACGGTGCTGTGGCAATAAAGTATGTTAGAAAGTTCGTAGCATCTAAAATGGCTGAGTTG
GGAATACCGTTAGACGTGATCGATTTTATACAAGGTAGGAAACCTACTCGCGTGCTAACGCAACATTATATTTCGCTTTT
CGGAATAGCGAAAGAACATTATCGCAAATATGCGGAATGGTTAAGTAAGAGTGGGGTGTTAAGTGATGATTGA

Upstream 100 bases:

>100_bases
AATAAGAGCAGTTTGGTCTAAAAATATTCAACAGATTAACTATGCATAAAATAGTTAATTAACTTAAATATCGAGGTAGC
GGATATGGGCCCGCTGGGAC

Downstream 100 bases:

>100_bases
TGACAAAACGTTAGTTGAGATAGCCGATTGCTTAGTGAAATACAGACACGTTGAAAACATTAGTAGCCTGAGCGTGGAAT
GTAGAAGAGTTGTTTGTTTT

Product: SSV1 integrase fragment homolog (orf D-335)

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNPGSSPCEGSKKGVERCKMTLVAILRQYSADYAQEFYDYLLNERKIGNKTAKEYVSAVNRPYKETDKSQKAYRIFAKFL
ESRGVISSEEMEKILRVIKVKRSNADLYIPTEEGIRKTLKLAKEYSENVYFVYRIALESGARLNEILKVLKKPEKDVCDS
ADDSNGRIRSNGSADGGISLCYYPLSWIRGSKGSFYVFHFSPLRKVTIGEGAIAGFERRRDGAVAIKYVRKFVASKMAEL
GIPLDVIDFIQGRKPTRVLTQHYISLFGIAKEHYRKYAEWLSKSGVLSDD

Sequences:

>Translated_290_residues
MNPGSSPCEGSKKGVERCKMTLVAILRQYSADYAQEFYDYLLNERKIGNKTAKEYVSAVNRPYKETDKSQKAYRIFAKFL
ESRGVISSEEMEKILRVIKVKRSNADLYIPTEEGIRKTLKLAKEYSENVYFVYRIALESGARLNEILKVLKKPEKDVCDS
ADDSNGRIRSNGSADGGISLCYYPLSWIRGSKGSFYVFHFSPLRKVTIGEGAIAGFERRRDGAVAIKYVRKFVASKMAEL
GIPLDVIDFIQGRKPTRVLTQHYISLFGIAKEHYRKYAEWLSKSGVLSDD
>Mature_290_residues
MNPGSSPCEGSKKGVERCKMTLVAILRQYSADYAQEFYDYLLNERKIGNKTAKEYVSAVNRPYKETDKSQKAYRIFAKFL
ESRGVISSEEMEKILRVIKVKRSNADLYIPTEEGIRKTLKLAKEYSENVYFVYRIALESGARLNEILKVLKKPEKDVCDS
ADDSNGRIRSNGSADGGISLCYYPLSWIRGSKGSFYVFHFSPLRKVTIGEGAIAGFERRRDGAVAIKYVRKFVASKMAEL
GIPLDVIDFIQGRKPTRVLTQHYISLFGIAKEHYRKYAEWLSKSGVLSDD

Specific function: Unknown

COG id: COG4342

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32955; Mature: 32955

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPGSSPCEGSKKGVERCKMTLVAILRQYSADYAQEFYDYLLNERKIGNKTAKEYVSAVN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHC
RPYKETDKSQKAYRIFAKFLESRGVISSEEMEKILRVIKVKRSNADLYIPTEEGIRKTLK
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHH
LAKEYSENVYFVYRIALESGARLNEILKVLKKPEKDVCDSADDSNGRIRSNGSADGGISL
HHHHHCCCEEEEEEEEHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCEEECCCCCCCCCEE
CYYPLSWIRGSKGSFYVFHFSPLRKVTIGEGAIAGFERRRDGAVAIKYVRKFVASKMAEL
HEEHHHHHCCCCCCEEEEEECCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GIPLDVIDFIQGRKPTRVLTQHYISLFGIAKEHYRKYAEWLSKSGVLSDD
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNPGSSPCEGSKKGVERCKMTLVAILRQYSADYAQEFYDYLLNERKIGNKTAKEYVSAVN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHC
RPYKETDKSQKAYRIFAKFLESRGVISSEEMEKILRVIKVKRSNADLYIPTEEGIRKTLK
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHH
LAKEYSENVYFVYRIALESGARLNEILKVLKKPEKDVCDSADDSNGRIRSNGSADGGISL
HHHHHCCCEEEEEEEEHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCEEECCCCCCCCCEE
CYYPLSWIRGSKGSFYVFHFSPLRKVTIGEGAIAGFERRRDGAVAIKYVRKFVASKMAEL
HEEHHHHHCCCCCCEEEEEECCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GIPLDVIDFIQGRKPTRVLTQHYISLFGIAKEHYRKYAEWLSKSGVLSDD
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA