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The map label for this gene is aspB-1 [C]

Identifier: 15897065

GI number: 15897065

Start: 85752

End: 86957

Strand: Direct

Name: aspB-1 [C]

Synonym: SSO0104

Alternate gene names: 15897065

Gene position: 85752-86957 (Clockwise)

Preceding gene: 15897063

Following gene: 15897067

Centisome position: 2.87

GC content: 35.49

Gene sequence:

>1206_bases
ATGTTTGAGAGATTTTTATCCACCGAAACTAAGTATTTACGTACCTCAGAAATAAGAGATCTACTAAAACTAACGGAAGG
TAAGAATGTAATTAGCCTTGCGGGAGGTTTACCTGATCCTCAGACTTTTCCAGTAGAAGAAATTAAAAAAATAGCAGATG
ACATCTTATTGAATAGTGCTGATAAGGCATTACAATATACTGCAACTGCTGGTATATCTGAATTTAGAAGAGAATTGGTG
AACTTATCTAGATTAAGGGGAATTAGTGGAATAGATGAAAGAAACGTCTTTGTTACAGTAGGAAGTCAAGAAGCACTTTT
CATGATATTTAATATATTACTAGATCCGGGAGACAATGTAGTAGTCGAGGCGCCAACTTATTTAGCAGCTTTAAATGCCA
TGAGAACTAGAAAGCCAAATTTCATATCGATAACAGTAACGGAAATGGGCCCAGATCTAGATGAATTGGAGAGAAAAATA
AAAGATGCCCATAGCAATGGGAAGAAGGTTAAACTGATGTATGTGATTCCAACAGCCCAGAATCCGGCGGGTACTACGAT
GAATACAGAGGATAGGAAAAGACTTTTAGAGATTGCATCGAAATATGATTTCTTAATTTTTGAGGATGATGCTTATGGGT
TCTTAGTATTCGAGGGAGAAAGTCCACCACCAATTAAAGCCTTCGATAAAGAAGGAAGAGTAATTTATACTAGCACATTT
AGTAAAATACTTGCACCCGGTTTAAGGTTAGGATGGGTAATTGCTCATGAAGATTTCATAAAGGAAATGGAACTATATAA
ACAAAATGTTGATTTGCATACACCTTCATTATCACAATATATTGCAATGGAGGCTATAAGGAGGGGTATAATTCAAAATA
ATTTACCTAAGATAAGGAGAGTGTATAAGGAAAAAAGAGATGTAATGCTAGAGGCTATTGAAACTTATTTCCCTAATGAT
GCCAGATGGACTAAACCAGTTGGTGGAATGTTTGTTTTTGCTTGGTTGCCACAAAAAATAGATACTACTAAGATGTTAGA
AAAAGCCTTACAAAGGGGTGTAGCTTATGTACCAGGTTCTAGTTTCTATGCTGACTATAGTGGAAAGAATACTATGAGGA
TCAACTTTAGTTTTCCTAAGAAAGAAGAATTAATAGAGGGAATTAAGAGGCTAGGAGATACGATAAAGCATGAGCTCTCT
ACTTAA

Upstream 100 bases:

>100_bases
GTTTTTCCACTTAATACCTCATTACCTATAGTTATGATTTCCGCGAACCAGTAATCCATAAAAATATTAACTATCGAAAC
CAATTAAAACTTGAGCCTTT

Downstream 100 bases:

>100_bases
AAATCTCTTCAGCGTTTATTACTACACCAGCTTTCGGTGATGGAAAAGAAACTAAAAGATCATTGGAAAATGATACTAAT
TCATTAAATAACTTATCATT

Product: aspartate aminotransferase (aspB-1)

Products: NA

Alternate protein names: AspB-1

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MFERFLSTETKYLRTSEIRDLLKLTEGKNVISLAGGLPDPQTFPVEEIKKIADDILLNSADKALQYTATAGISEFRRELV
NLSRLRGISGIDERNVFVTVGSQEALFMIFNILLDPGDNVVVEAPTYLAALNAMRTRKPNFISITVTEMGPDLDELERKI
KDAHSNGKKVKLMYVIPTAQNPAGTTMNTEDRKRLLEIASKYDFLIFEDDAYGFLVFEGESPPPIKAFDKEGRVIYTSTF
SKILAPGLRLGWVIAHEDFIKEMELYKQNVDLHTPSLSQYIAMEAIRRGIIQNNLPKIRRVYKEKRDVMLEAIETYFPND
ARWTKPVGGMFVFAWLPQKIDTTKMLEKALQRGVAYVPGSSFYADYSGKNTMRINFSFPKKEELIEGIKRLGDTIKHELS
T

Sequences:

>Translated_401_residues
MFERFLSTETKYLRTSEIRDLLKLTEGKNVISLAGGLPDPQTFPVEEIKKIADDILLNSADKALQYTATAGISEFRRELV
NLSRLRGISGIDERNVFVTVGSQEALFMIFNILLDPGDNVVVEAPTYLAALNAMRTRKPNFISITVTEMGPDLDELERKI
KDAHSNGKKVKLMYVIPTAQNPAGTTMNTEDRKRLLEIASKYDFLIFEDDAYGFLVFEGESPPPIKAFDKEGRVIYTSTF
SKILAPGLRLGWVIAHEDFIKEMELYKQNVDLHTPSLSQYIAMEAIRRGIIQNNLPKIRRVYKEKRDVMLEAIETYFPND
ARWTKPVGGMFVFAWLPQKIDTTKMLEKALQRGVAYVPGSSFYADYSGKNTMRINFSFPKKEELIEGIKRLGDTIKHELS
T
>Mature_401_residues
MFERFLSTETKYLRTSEIRDLLKLTEGKNVISLAGGLPDPQTFPVEEIKKIADDILLNSADKALQYTATAGISEFRRELV
NLSRLRGISGIDERNVFVTVGSQEALFMIFNILLDPGDNVVVEAPTYLAALNAMRTRKPNFISITVTEMGPDLDELERKI
KDAHSNGKKVKLMYVIPTAQNPAGTTMNTEDRKRLLEIASKYDFLIFEDDAYGFLVFEGESPPPIKAFDKEGRVIYTSTF
SKILAPGLRLGWVIAHEDFIKEMELYKQNVDLHTPSLSQYIAMEAIRRGIIQNNLPKIRRVYKEKRDVMLEAIETYFPND
ARWTKPVGGMFVFAWLPQKIDTTKMLEKALQRGVAYVPGSSFYADYSGKNTMRINFSFPKKEELIEGIKRLGDTIKHELS
T

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family

Homologues:

Organism=Homo sapiens, GI7705897, Length=429, Percent_Identity=33.1002331002331, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI33469970, Length=429, Percent_Identity=33.1002331002331, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI95147551, Length=314, Percent_Identity=25.4777070063694, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI169881279, Length=314, Percent_Identity=25.4777070063694, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI56713254, Length=340, Percent_Identity=28.2352941176471, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI56713256, Length=340, Percent_Identity=28.2352941176471, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI1787710, Length=385, Percent_Identity=27.2727272727273, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1790797, Length=380, Percent_Identity=26.3157894736842, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1788722, Length=379, Percent_Identity=25.8575197889182, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI48994949, Length=416, Percent_Identity=23.7980769230769, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1788627, Length=358, Percent_Identity=24.3016759776536, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17567369, Length=291, Percent_Identity=25.7731958762887, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6321236, Length=490, Percent_Identity=25.5102040816327, Blast_Score=138, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6321929, Length=496, Percent_Identity=26.008064516129, Blast_Score=123, Evalue=7e-29,
Organism=Saccharomyces cerevisiae, GI6321000, Length=252, Percent_Identity=31.3492063492063, Blast_Score=110, Evalue=4e-25,
Organism=Drosophila melanogaster, GI21356535, Length=424, Percent_Identity=25.4716981132075, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI28573069, Length=390, Percent_Identity=25.3846153846154, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24646114, Length=390, Percent_Identity=25.3846153846154, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI28573067, Length=390, Percent_Identity=25.3846153846154, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI28573065, Length=390, Percent_Identity=25.3846153846154, Blast_Score=82, Evalue=7e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): Y104_SULSO (P95957)

Other databases:

- EMBL:   Y08257
- EMBL:   AE006641
- PIR:   S75385
- RefSeq:   NP_341670.1
- ProteinModelPortal:   P95957
- SMR:   P95957
- GeneID:   1453288
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO0104
- NMPDR:   fig|273057.1.peg.93
- HOGENOM:   HBG752297
- OMA:   IFAPGFR
- PhylomeDB:   P95957
- ProtClustDB:   CLSK802556
- BioCyc:   SSOL273057:SSO0104-MONOMER
- GO:   GO:0005737
- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- Gene3D:   G3DSA:3.40.640.10
- Gene3D:   G3DSA:3.90.1150.10

Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major

EC number: NA

Molecular weight: Translated: 45572; Mature: 45572

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFERFLSTETKYLRTSEIRDLLKLTEGKNVISLAGGLPDPQTFPVEEIKKIADDILLNSA
CCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCH
DKALQYTATAGISEFRRELVNLSRLRGISGIDERNVFVTVGSQEALFMIFNILLDPGDNV
HHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCE
VVEAPTYLAALNAMRTRKPNFISITVTEMGPDLDELERKIKDAHSNGKKVKLMYVIPTAQ
EEECCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCC
NPAGTTMNTEDRKRLLEIASKYDFLIFEDDAYGFLVFEGESPPPIKAFDKEGRVIYTSTF
CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEECH
SKILAPGLRLGWVIAHEDFIKEMELYKQNVDLHTPSLSQYIAMEAIRRGIIQNNLPKIRR
HHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
VYKEKRDVMLEAIETYFPNDARWTKPVGGMFVFAWLPQKIDTTKMLEKALQRGVAYVPGS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEECCCC
SFYADYSGKNTMRINFSFPKKEELIEGIKRLGDTIKHELST
CEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFERFLSTETKYLRTSEIRDLLKLTEGKNVISLAGGLPDPQTFPVEEIKKIADDILLNSA
CCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCH
DKALQYTATAGISEFRRELVNLSRLRGISGIDERNVFVTVGSQEALFMIFNILLDPGDNV
HHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCE
VVEAPTYLAALNAMRTRKPNFISITVTEMGPDLDELERKIKDAHSNGKKVKLMYVIPTAQ
EEECCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCC
NPAGTTMNTEDRKRLLEIASKYDFLIFEDDAYGFLVFEGESPPPIKAFDKEGRVIYTSTF
CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEECH
SKILAPGLRLGWVIAHEDFIKEMELYKQNVDLHTPSLSQYIAMEAIRRGIIQNNLPKIRR
HHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
VYKEKRDVMLEAIETYFPNDARWTKPVGGMFVFAWLPQKIDTTKMLEKALQRGVAYVPGS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEECCCC
SFYADYSGKNTMRINFSFPKKEELIEGIKRLGDTIKHELST
CEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726