Click here to switch to the map view.

The map label for this gene is dnaG

Identifier: 15897045

GI number: 15897045

Start: 62827

End: 64047

Strand: Direct

Name: dnaG

Synonym: SSO0079

Alternate gene names: NA

Gene position: 62827-64047 (Clockwise)

Preceding gene: 15897044

Following gene: 15897048

Centisome position: 2.1

GC content: 35.22

Gene sequence:

>1221_bases
GTGAGCTTCCAAATGAAATATGATATAAGGTTAAGATTTGAAGTAGAGGGTATAGTCGAAAAAACTGATGTAATAGGTGC
AATATTTGGCCAGACTGAAAACTTATTTGGAGATGAATTCGACCTAAGAGAGTTGCAAGATAAGGGAAGATTGGGAAGGA
TTATTGTAGAGGTAAAAACTAAAGGAGGGAAAAGCGAAGGAGAAATAATTATACCATCGAACTTAGACAGAATTGAGACC
GCATTAATTGCTGCAATGGTTGAAAGTGTAGATAAGGTAGGACCATACAATTCAAAATTTGAGCTTATAGAAATAGAAGA
CATTAGAGCTGAGAAACTTAAAAAAATCATAGAAAGAGCAAAGGGAATTTTGTCAAGCTGGAGTAAAGAGAAATCACTGG
ACATAAAGGAAGTAATAAATGAGATAAGTAGCGCAGTAAAGGTAGGGGAAATAACAGAATATGGACCAGAAAGATTACCC
GCAGGCCCAGACGTGGACAAGGATCCTAATTTAATAATAGTAGAAGGAAGAGCTGATGTAATAAATCTACTCAGATATGG
CTACAAAAACGTAATAGCAGTAGAAGGAGCCACGTCAAGGATACCGGAAACACTAATTAACTTATCTAAGATGAAGAAGA
CAGTAATAGCGTTTTTAGACGGAGACCACGGTGGAGATCTGATACTCAAAGAATTATTAAGTAATAATGTAAAGATAGAT
TTCGTAGCAAGAGCACCGATTGGCAGAGAGGTAGAAGAACTAACAGGGAAAGAAATTGCAAAAGCCCTTTCCAATATGAT
GCCACTTACTCAATATCTAAAGAAGGTTCAAGAGGCAGAACAAGCAATAGCTAAAAATGTTATTGCAAAAGAAGAGAAAC
CAATACAGTCTGAAACTACACAACAAGTAGTCCAGATAACTTTGCCACAAAATATCCTTGAAGAAATCAAGAAACTCCCT
GGAACTCTAGAGGGCGTTCTCTATGATAATAATTGGAATTTGATTGAGAAAGTTCAAGTACGAGATATAATACCTAAGTT
AGAGGCTTACGAAGACAATAAAGTAGCTTATATAATATTTGATGGGGTAATAACTCAAAGATTATTAGATTTAGCGTCTC
AAAAAAACATTAAAATGATAATAGGAGCTAGAATAGGTGGAATAAACAAAAGACCGCAAAACGTCGATATATTGACATTT
ACCGATATTATTTCTTCTTAG

Upstream 100 bases:

>100_bases
AATGAGATATTAGAACCTATAAGAAAAAGTTTAGAAAAGAAACCCGAGTTCGAGGAAATGATTCAGAAGATATCCAAAAG
TGTAACAAGGTAATGTAAAG

Downstream 100 bases:

>100_bases
AAGCTCCAAATAAGTCTAGTATATCAGTTATATTAGTTTTTTTCAAACTTTCCTCATTTACTCCTAAAGGCTTGAGTAGC
TTTAGGGTTTCTCTAAATAT

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSFQMKYDIRLRFEVEGIVEKTDVIGAIFGQTENLFGDEFDLRELQDKGRLGRIIVEVKTKGGKSEGEIIIPSNLDRIET
ALIAAMVESVDKVGPYNSKFELIEIEDIRAEKLKKIIERAKGILSSWSKEKSLDIKEVINEISSAVKVGEITEYGPERLP
AGPDVDKDPNLIIVEGRADVINLLRYGYKNVIAVEGATSRIPETLINLSKMKKTVIAFLDGDHGGDLILKELLSNNVKID
FVARAPIGREVEELTGKEIAKALSNMMPLTQYLKKVQEAEQAIAKNVIAKEEKPIQSETTQQVVQITLPQNILEEIKKLP
GTLEGVLYDNNWNLIEKVQVRDIIPKLEAYEDNKVAYIIFDGVITQRLLDLASQKNIKMIIGARIGGINKRPQNVDILTF
TDIISS

Sequences:

>Translated_406_residues
MSFQMKYDIRLRFEVEGIVEKTDVIGAIFGQTENLFGDEFDLRELQDKGRLGRIIVEVKTKGGKSEGEIIIPSNLDRIET
ALIAAMVESVDKVGPYNSKFELIEIEDIRAEKLKKIIERAKGILSSWSKEKSLDIKEVINEISSAVKVGEITEYGPERLP
AGPDVDKDPNLIIVEGRADVINLLRYGYKNVIAVEGATSRIPETLINLSKMKKTVIAFLDGDHGGDLILKELLSNNVKID
FVARAPIGREVEELTGKEIAKALSNMMPLTQYLKKVQEAEQAIAKNVIAKEEKPIQSETTQQVVQITLPQNILEEIKKLP
GTLEGVLYDNNWNLIEKVQVRDIIPKLEAYEDNKVAYIIFDGVITQRLLDLASQKNIKMIIGARIGGINKRPQNVDILTF
TDIISS
>Mature_405_residues
SFQMKYDIRLRFEVEGIVEKTDVIGAIFGQTENLFGDEFDLRELQDKGRLGRIIVEVKTKGGKSEGEIIIPSNLDRIETA
LIAAMVESVDKVGPYNSKFELIEIEDIRAEKLKKIIERAKGILSSWSKEKSLDIKEVINEISSAVKVGEITEYGPERLPA
GPDVDKDPNLIIVEGRADVINLLRYGYKNVIAVEGATSRIPETLINLSKMKKTVIAFLDGDHGGDLILKELLSNNVKIDF
VARAPIGREVEELTGKEIAKALSNMMPLTQYLKKVQEAEQAIAKNVIAKEEKPIQSETTQQVVQITLPQNILEEIKKLPG
TLEGVLYDNNWNLIEKVQVRDIIPKLEAYEDNKVAYIIFDGVITQRLLDLASQKNIKMIIGARIGGINKRPQNVDILTFT
DIISS

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y079_SULSO (P95980)

Other databases:

- EMBL:   Y08257
- EMBL:   AE006641
- PIR:   S75408
- RefSeq:   NP_341650.1
- ProteinModelPortal:   P95980
- SMR:   P95980
- GeneID:   1455331
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO0079
- NMPDR:   fig|273057.1.peg.73
- HOGENOM:   HBG541216
- OMA:   GYRNVIA
- ProtClustDB:   PRK04031
- BioCyc:   SSOL273057:SSO0079-MONOMER
- HAMAP:   MF_00007
- InterPro:   IPR006171
- InterPro:   IPR020607
- SMART:   SM00493

Pfam domain/function: PF01751 Toprim

EC number: NA

Molecular weight: Translated: 45410; Mature: 45279

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQMKYDIRLRFEVEGIVEKTDVIGAIFGQTENLFGDEFDLRELQDKGRLGRIIVEVKT
CCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEEEEEC
KGGKSEGEIIIPSNLDRIETALIAAMVESVDKVGPYNSKFELIEIEDIRAEKLKKIIERA
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHH
KGILSSWSKEKSLDIKEVINEISSAVKVGEITEYGPERLPAGPDVDKDPNLIIVEGRADV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEEECCHHH
INLLRYGYKNVIAVEGATSRIPETLINLSKMKKTVIAFLDGDHGGDLILKELLSNNVKID
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCEEE
FVARAPIGREVEELTGKEIAKALSNMMPLTQYLKKVQEAEQAIAKNVIAKEEKPIQSETT
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QQVVQITLPQNILEEIKKLPGTLEGVLYDNNWNLIEKVQVRDIIPKLEAYEDNKVAYIIF
HHHHEEECCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
DGVITQRLLDLASQKNIKMIIGARIGGINKRPQNVDILTFTDIISS
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEHHHHHCC
>Mature Secondary Structure 
SFQMKYDIRLRFEVEGIVEKTDVIGAIFGQTENLFGDEFDLRELQDKGRLGRIIVEVKT
CCEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEEEEEC
KGGKSEGEIIIPSNLDRIETALIAAMVESVDKVGPYNSKFELIEIEDIRAEKLKKIIERA
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHH
KGILSSWSKEKSLDIKEVINEISSAVKVGEITEYGPERLPAGPDVDKDPNLIIVEGRADV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEEECCHHH
INLLRYGYKNVIAVEGATSRIPETLINLSKMKKTVIAFLDGDHGGDLILKELLSNNVKID
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCEEE
FVARAPIGREVEELTGKEIAKALSNMMPLTQYLKKVQEAEQAIAKNVIAKEEKPIQSETT
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QQVVQITLPQNILEEIKKLPGTLEGVLYDNNWNLIEKVQVRDIIPKLEAYEDNKVAYIIF
HHHHEEECCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
DGVITQRLLDLASQKNIKMIIGARIGGINKRPQNVDILTFTDIISS
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726