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The map label for this gene is rbsK-1 [H]

Identifier: 15896975

GI number: 15896975

Start: 2088

End: 2969

Strand: Direct

Name: rbsK-1 [H]

Synonym: SSO0004

Alternate gene names: 15896975

Gene position: 2088-2969 (Clockwise)

Preceding gene: 15896974

Following gene: 15896976

Centisome position: 0.07

GC content: 35.71

Gene sequence:

>882_bases
TTGATAATCGTAGTAGGAAGTTACAACGTTGATGTAATATTGAAAGTTAATAAAATACCTGAAATTGGAGAAACTGTAAT
AGCTGATGAATTATACATAACGCATGGAGGTAAAGGCTCAAATCAGGCAGTATCAGCTTCAAGATTAGGAAGCCATGTTA
AAATAATCGTTGCAGTGGGAGATGATAAACATGGAACTGATGCGATCGAATTTTGGAAATCAGAAAATATTGACGTATCT
AAAGTGAAAGTAAAGAGTGGTATAAACACTGGAACTGCATATATATTCGTTGACAAGAAAGGAAGAAATATCATTGTTGT
AAACAGAGGTGCAAATTACTATTTGTCAGAAGACGATTTAAATAATAGCCTCGAGGGTGACATATTATTAATGCAATTGG
AAATAAGGGAAAGTGTAGTTAAAAAGGCAGCAAAGGAGTTTAACGGAATAAAAATACTTAATCCCGCCCCAGCTAACCTT
AAAGATACTGAAATTTTGTCATTAGTAGATATTATAACACCTAATGAAATAGAGTTCAAAGAGTTAGTAAATACTGACGA
TTTCGAATATGGTTTAAATCTATTGCTAAAGAAAGTAAAAAAGGCGGTGATAGTTACGCTAGGGGAAAGAGGAGCACTTC
TGGCAACTAGAGACGGAAAAAAGGTACTTATACCAGCTCCTAAAGTAAATGTTATCGATGAAACGGGAGCTGGTGACGTA
TTTAATGCAGCGCTTTCCGTGTATTTAGAAAAGGGGTATGACCTTGAGACTGCAGTTGAATATGCGAATAAGGTTGCAGC
GCTTTCCGTAACTAAGATAGGAGCTTTAGGACCAAAATTAGATGAGGTGGTGAGATTTCTTGAAGAAATCGACAAAGCGT
AA

Upstream 100 bases:

>100_bases
GTGGTATTAATGGGGACGCAATACTACGAGATAATATGGTATTAATTATAGCCAAGGATAAGGATGAGTTAATAAGAAAG
TTAAAAGAGGTAGCTATAGG

Downstream 100 bases:

>100_bases
AATGAAAAGTGATAGAAAAGAAGAGGAACATTGCATAGCAGGATTTTGTGATCTAGATTTTGTAGATATAACGGAGCGAG
AGGATCTATGAAAATTACCT

Product: ribokinase (rbsK-1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIIVVGSYNVDVILKVNKIPEIGETVIADELYITHGGKGSNQAVSASRLGSHVKIIVAVGDDKHGTDAIEFWKSENIDVS
KVKVKSGINTGTAYIFVDKKGRNIIVVNRGANYYLSEDDLNNSLEGDILLMQLEIRESVVKKAAKEFNGIKILNPAPANL
KDTEILSLVDIITPNEIEFKELVNTDDFEYGLNLLLKKVKKAVIVTLGERGALLATRDGKKVLIPAPKVNVIDETGAGDV
FNAALSVYLEKGYDLETAVEYANKVAALSVTKIGALGPKLDEVVRFLEEIDKA

Sequences:

>Translated_293_residues
MIIVVGSYNVDVILKVNKIPEIGETVIADELYITHGGKGSNQAVSASRLGSHVKIIVAVGDDKHGTDAIEFWKSENIDVS
KVKVKSGINTGTAYIFVDKKGRNIIVVNRGANYYLSEDDLNNSLEGDILLMQLEIRESVVKKAAKEFNGIKILNPAPANL
KDTEILSLVDIITPNEIEFKELVNTDDFEYGLNLLLKKVKKAVIVTLGERGALLATRDGKKVLIPAPKVNVIDETGAGDV
FNAALSVYLEKGYDLETAVEYANKVAALSVTKIGALGPKLDEVVRFLEEIDKA
>Mature_293_residues
MIIVVGSYNVDVILKVNKIPEIGETVIADELYITHGGKGSNQAVSASRLGSHVKIIVAVGDDKHGTDAIEFWKSENIDVS
KVKVKSGINTGTAYIFVDKKGRNIIVVNRGANYYLSEDDLNNSLEGDILLMQLEIRESVVKKAAKEFNGIKILNPAPANL
KDTEILSLVDIITPNEIEFKELVNTDDFEYGLNLLLKKVKKAVIVTLGERGALLATRDGKKVLIPAPKVNVIDETGAGDV
FNAALSVYLEKGYDLETAVEYANKVAALSVTKIGALGPKLDEVVRFLEEIDKA

Specific function: Ribose metabolism; first step. [C]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=286, Percent_Identity=35.3146853146853, Blast_Score=141, Evalue=8e-34,
Organism=Escherichia coli, GI1790193, Length=302, Percent_Identity=38.7417218543046, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI87082343, Length=301, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081971, Length=293, Percent_Identity=25.938566552901, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17532905, Length=305, Percent_Identity=37.0491803278689, Blast_Score=140, Evalue=6e-34,
Organism=Saccharomyces cerevisiae, GI6319884, Length=317, Percent_Identity=30.5993690851735, Blast_Score=113, Evalue=3e-26,
Organism=Drosophila melanogaster, GI20128807, Length=292, Percent_Identity=33.9041095890411, Blast_Score=137, Evalue=9e-33,
Organism=Drosophila melanogaster, GI24583886, Length=290, Percent_Identity=27.9310344827586, Blast_Score=118, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR011877
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.15 [H]

Molecular weight: Translated: 31836; Mature: 31836

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVVGSYNVDVILKVNKIPEIGETVIADELYITHGGKGSNQAVSASRLGSHVKIIVAVG
CEEEEECCCEEEEEEECCCCCCCCEEEECEEEEEECCCCCCCCEEHHHCCCEEEEEEEEC
DDKHGTDAIEFWKSENIDVSKVKVKSGINTGTAYIFVDKKGRNIIVVNRGANYYLSEDDL
CCCCCCHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEECCCCC
NNSLEGDILLMQLEIRESVVKKAAKEFNGIKILNPAPANLKDTEILSLVDIITPNEIEFK
CCCCCCCEEEEEEHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHH
ELVNTDDFEYGLNLLLKKVKKAVIVTLGERGALLATRDGKKVLIPAPKVNVIDETGAGDV
HHCCCCCHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCEEEEECCCEEEEECCCCCHH
FNAALSVYLEKGYDLETAVEYANKVAALSVTKIGALGPKLDEVVRFLEEIDKA
HHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIVVGSYNVDVILKVNKIPEIGETVIADELYITHGGKGSNQAVSASRLGSHVKIIVAVG
CEEEEECCCEEEEEEECCCCCCCCEEEECEEEEEECCCCCCCCEEHHHCCCEEEEEEEEC
DDKHGTDAIEFWKSENIDVSKVKVKSGINTGTAYIFVDKKGRNIIVVNRGANYYLSEDDL
CCCCCCHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEECCCCC
NNSLEGDILLMQLEIRESVVKKAAKEFNGIKILNPAPANLKDTEILSLVDIITPNEIEFK
CCCCCCCEEEEEEHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHH
ELVNTDDFEYGLNLLLKKVKKAVIVTLGERGALLATRDGKKVLIPAPKVNVIDETGAGDV
HHCCCCCHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCEEEEECCCEEEEECCCCCHH
FNAALSVYLEKGYDLETAVEYANKVAALSVTKIGALGPKLDEVVRFLEEIDKA
HHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]