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The map label for this gene is rnz [C]

Identifier: 15896976

GI number: 15896976

Start: 3057

End: 3743

Strand: Direct

Name: rnz [C]

Synonym: SSO0006

Alternate gene names: 15896976

Gene position: 3057-3743 (Clockwise)

Preceding gene: 15896975

Following gene: 15896977

Centisome position: 0.1

GC content: 32.75

Gene sequence:

>687_bases
ATGAAAATTACCTTTATTGGAACTGGAGCTGGTTCTAGTCTAGGGCTAAAAAGGGTTAAGTCCAGTATATTAATTAACGA
TAAAGTACTTCTTGACTTAGGTCCTGGGGCTGAGTTAAGATTAGAAGATCTAAGAATACATCCGAAAGCTCTCTTTATTA
CTCATTTGCATATTGATCATTTCAGTGGAGTTTTTGACTATTTAGTCCAGAGGAAAATAAGACAAATCCCCGAATTAGTA
ATCTATTCTCCCAAAGGCTTTTCAGAAGTCCTAAACATATACACTAGAATAGGAAATAATATTTCGGCTAAAATATATGA
AAGCGACTTACCCAGCGGTAAAATTGACGAAATGGAAATATATTCGATTCAAGCTTGTCACTCGATTTATGCCGTTAGCT
ACATTATAAGCGATGGAAATACGAGAGTATTATATACTGGTGATACTAAAGAACCTTGTAATGCTATACTAGAAAACATA
AAAGATGTTGATTTGATCATTCATGAAACAACTTGTGTAGATGACTGTAGTATTTGGGGACATACTTCAATAAAACAAAT
ATTTGAGTTATTTAGCAATAAGAGAATTTTTGCTACACACATTCCGGCCGAAATTGAAGAAAAAATAATAAGCCTTGCTA
ATAATAAAATAAATATTGCTTTTGACGGGTTGTCATTAAATGTGTAG

Upstream 100 bases:

>100_bases
CGACAAAGCGTAAAATGAAAAGTGATAGAAAAGAAGAGGAACATTGCATAGCAGGATTTTGTGATCTAGATTTTGTAGAT
ATAACGGAGCGAGAGGATCT

Downstream 100 bases:

>100_bases
AATTTTGGCTTTTCATACTAAGGGCGAAATTTCAAAAGAATACGTAAATGCATTAATAAGGGCAAGTAGAAATGATATTT
TCTCTAAATATGGAAGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-Lactamase Domain-Containing Protein; Beta-Lactamase-Like Protein; Metal Dependent Hydrolase; Arylsulfatase; Ribonuclease Z

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKITFIGTGAGSSLGLKRVKSSILINDKVLLDLGPGAELRLEDLRIHPKALFITHLHIDHFSGVFDYLVQRKIRQIPELV
IYSPKGFSEVLNIYTRIGNNISAKIYESDLPSGKIDEMEIYSIQACHSIYAVSYIISDGNTRVLYTGDTKEPCNAILENI
KDVDLIIHETTCVDDCSIWGHTSIKQIFELFSNKRIFATHIPAEIEEKIISLANNKINIAFDGLSLNV

Sequences:

>Translated_228_residues
MKITFIGTGAGSSLGLKRVKSSILINDKVLLDLGPGAELRLEDLRIHPKALFITHLHIDHFSGVFDYLVQRKIRQIPELV
IYSPKGFSEVLNIYTRIGNNISAKIYESDLPSGKIDEMEIYSIQACHSIYAVSYIISDGNTRVLYTGDTKEPCNAILENI
KDVDLIIHETTCVDDCSIWGHTSIKQIFELFSNKRIFATHIPAEIEEKIISLANNKINIAFDGLSLNV
>Mature_228_residues
MKITFIGTGAGSSLGLKRVKSSILINDKVLLDLGPGAELRLEDLRIHPKALFITHLHIDHFSGVFDYLVQRKIRQIPELV
IYSPKGFSEVLNIYTRIGNNISAKIYESDLPSGKIDEMEIYSIQACHSIYAVSYIISDGNTRVLYTGDTKEPCNAILENI
KDVDLIIHETTCVDDCSIWGHTSIKQIFELFSNKRIFATHIPAEIEEKIISLANNKINIAFDGLSLNV

Specific function: Zinc Phosphodiesterase, Which Displays Some Trna 3'- Processing Endonuclease Activity. Probably Involved In Trna Maturation, By Removing A 3'Trailer From Precursor Trna. [C]

COG id: COG1234

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24652403, Length=278, Percent_Identity=23.7410071942446, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.26.11 [C]

Molecular weight: Translated: 25534; Mature: 25534

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITFIGTGAGSSLGLKRVKSSILINDKVLLDLGPGAELRLEDLRIHPKALFITHLHIDH
CEEEEEECCCCCHHHHHHHHHHEEECCEEEEEECCCCCEEEECEEECCEEEEEEEEEHHH
FSGVFDYLVQRKIRQIPELVIYSPKGFSEVLNIYTRIGNNISAKIYESDLPSGKIDEMEI
HHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEE
YSIQACHSIYAVSYIISDGNTRVLYTGDTKEPCNAILENIKDVDLIIHETTCVDDCSIWG
EEHHHHHHHEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCC
HTSIKQIFELFSNKRIFATHIPAEIEEKIISLANNKINIAFDGLSLNV
CHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEEEEECEEECC
>Mature Secondary Structure
MKITFIGTGAGSSLGLKRVKSSILINDKVLLDLGPGAELRLEDLRIHPKALFITHLHIDH
CEEEEEECCCCCHHHHHHHHHHEEECCEEEEEECCCCCEEEECEEECCEEEEEEEEEHHH
FSGVFDYLVQRKIRQIPELVIYSPKGFSEVLNIYTRIGNNISAKIYESDLPSGKIDEMEI
HHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEE
YSIQACHSIYAVSYIISDGNTRVLYTGDTKEPCNAILENIKDVDLIIHETTCVDDCSIWG
EEHHHHHHHEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCC
HTSIKQIFELFSNKRIFATHIPAEIEEKIISLANNKINIAFDGLSLNV
CHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEEEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA