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The map label for this gene is recO

Identifier: 15927146

GI number: 15927146

Start: 1601917

End: 1602669

Strand: Reverse

Name: recO

Synonym: SA1395

Alternate gene names: 15927146

Gene position: 1602669-1601917 (Counterclockwise)

Preceding gene: 15927147

Following gene: 15927144

Centisome position: 56.94

GC content: 32.54

Gene sequence:

>753_bases
TTGTTAATGCGCCAAAAAGGGATTATCATCAAAGCAGTTGATTATGGTGAATCTGATAAAATTATCACGATTTTAAATGA
GCATGGTGCAAAAGTACCACTTATGGCAAGGCGTGCTAAAAAAGTTAAGACGGGTTTACAAGCGCAAACGCAATTGTTTG
TTTATGGTTTGTTTATTTACAATCAGTGGCGAGGTATGGGAACGTTAAATTCTGTAGATGTTATTAGTCAACATTATAAA
TTACAAATGGACCTTTACGTAAGCAGTTATGCCTCTCTGGCAGCTGAAACTATTGAGCGCTCAATGGATGAAGGTGACAT
TGCACCATATAACTATCAATTATTACAATTTGTTCTTGAAAAAATAGAATCAGGTACATCTGCACAGTTAATGTCAGTCG
TAGTTATGTTAAAGTGCATGAAACGATTTGGTTTTACTGCATCATTTAATCGCTGTGCTGTGAGTGGTAATGACACACAA
GCAGATTTAATAGGTTATAGTTTTAAGTTTGACGGTGCGATTTCAAGGCAAGAGGCTTCTAAAGATGTACATGCAGTTAT
ATTATCGAATAAAACACTATATTTATTAGATGTATTACAAAAATTACCGATAGATAAAATGAATTCATTGAATATCCATC
AAGAAATTATTGATGAAATGTCAGATATCATTTTAATGTTATATCGTGAATATGCAGGTATGTTTTTTAAAAGTCAGAAA
CTAATCAACCAATTAAAAAGATTGGAACAATAA

Upstream 100 bases:

>100_bases
ATGGGTCAAAGTTCAAAGAGACTGGCGAAACAAAGTTAACTTTATTCGCCAAATTGGTTATGTTGAAGACCAAGATTAAT
CTTAAAAGTGGTGAAGATAA

Downstream 100 bases:

>100_bases
CATAAAATAATAAAAGGTATTCAAGTAGCCACATAGATGTGTTTATTTGAATACCTTTTTGAATAGAAAAGAGATACTGG
CAATTTTACTAACCAGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNQWRGMGTLNSVDVISQHYK
LQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQ
ADLIGYSFKFDGAISRQEASKDVHAVILSNKTLYLLDVLQKLPIDKMNSLNIHQEIIDEMSDIILMLYREYAGMFFKSQK
LINQLKRLEQ

Sequences:

>Translated_250_residues
MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNQWRGMGTLNSVDVISQHYK
LQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQ
ADLIGYSFKFDGAISRQEASKDVHAVILSNKTLYLLDVLQKLPIDKMNSLNIHQEIIDEMSDIILMLYREYAGMFFKSQK
LINQLKRLEQ
>Mature_250_residues
MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNQWRGMGTLNSVDVISQHYK
LQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQ
ADLIGYSFKFDGAISRQEASKDVHAVILSNKTLYLLDVLQKLPIDKMNSLNIHQEIIDEMSDIILMLYREYAGMFFKSQK
LINQLKRLEQ

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_STAA1 (A7X2W3)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442143.1
- STRING:   A7X2W3
- EnsemblBacteria:   EBSTAT00000003447
- GeneID:   5559392
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_1553
- eggNOG:   COG1381
- GeneTree:   EBGT00050000024483
- HOGENOM:   HBG535315
- OMA:   VMARGAK
- ProtClustDB:   CLSK885433
- BioCyc:   SAUR418127:SAHV_1553-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 28467; Mature: 28467

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIY
CCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQWRGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLE
HHHCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
KIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEAS
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHEEEEEEECCCCCHHHHC
KDVHAVILSNKTLYLLDVLQKLPIDKMNSLNIHQEIIDEMSDIILMLYREYAGMFFKSQK
CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LINQLKRLEQ
HHHHHHHHCC
>Mature Secondary Structure
MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIY
CCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQWRGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLE
HHHCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
KIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEAS
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHEEEEEEECCCCCHHHHC
KDVHAVILSNKTLYLLDVLQKLPIDKMNSLNIHQEIIDEMSDIILMLYREYAGMFFKSQK
CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LINQLKRLEQ
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA