Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 16127946

GI number: 16127946

Start: 3971386

End: 3971994

Strand: Direct

Name: uidR [C]

Synonym: CC_3716

Alternate gene names: 16127946

Gene position: 3971386-3971994 (Clockwise)

Preceding gene: 16127945

Following gene: 16127952

Centisome position: 98.87

GC content: 65.02

Gene sequence:

>609_bases
ATGCCCCGCGTCCCAGGACAGATCGATGTCGCCAAGACCGAGGCGATCCTCGACGCGGCCGTCGAGGTCATCGGCGAGCG
CGGTCTGGCCGCGCCGATGTCGGCGATCGCGCGCCATGCAGGCGTCTCCAAGCAGACGGTCTATAATCACTACGGCTCGA
AGGCCGAACTGATGCGGGCCCTGATGCAGCGCCGCGTCGAGAGCATCACCGCTTCCCTGCGCGAACCCGGCGCGGTCGAC
AATCCGACAGAAGCGCTGGAGGCCTATGCCCGTTCGGTGCTGGAGACGATGATCACCACTAAGAGCTATTCGATGATGCG
GGTGATCATCCTGGGTTCGGGCGAAATGCCCGACATCGCCCAGGAAGTCTTCGAAGCCGGACCACAGAACGCGCGTCGCC
AGCTGGCCGCGTTCCTGGAGACCGAAACGCGCCTGGGGCGGATGAAGGTGGAAGACTTCGACCAGGCGGCGGAGTTCTTC
TCCGGCATGGTCATGGGCCACAGCCAACTGCGCGCGCTTCTGCGCCTGCCCTCTGAAAAGAGCCAGGAACAGTTCGGCCG
CCTCGCACGGGAAGCGGCCGAACGTTTCATGCGGGCCTACGCGCCGTAA

Upstream 100 bases:

>100_bases
ATCGGCTGCTTTATCGCGGCGGCTGTTTCCCTGTTGGCCGCGCCCGTCAAGAACGCGCCACCCCCGCCGTCTGACGCCCA
CTGATGTCTGGAGTCTTCTG

Downstream 100 bases:

>100_bases
GCCTGGACAGAGGAGGCTTAAGCCTCCTCGGCGTCAGGCATGCCCATCATGTGGAAGCCAGCGTCGACGTGGACGACCTC
GCCGGTGGTCGACTTGCCAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR-Type Transcriptional Regulator; TetR-Family Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator Protein; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Regulatory Protein Tetr; Transcriptional Regulator TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MPRVPGQIDVAKTEAILDAAVEVIGERGLAAPMSAIARHAGVSKQTVYNHYGSKAELMRALMQRRVESITASLREPGAVD
NPTEALEAYARSVLETMITTKSYSMMRVIILGSGEMPDIAQEVFEAGPQNARRQLAAFLETETRLGRMKVEDFDQAAEFF
SGMVMGHSQLRALLRLPSEKSQEQFGRLAREAAERFMRAYAP

Sequences:

>Translated_202_residues
MPRVPGQIDVAKTEAILDAAVEVIGERGLAAPMSAIARHAGVSKQTVYNHYGSKAELMRALMQRRVESITASLREPGAVD
NPTEALEAYARSVLETMITTKSYSMMRVIILGSGEMPDIAQEVFEAGPQNARRQLAAFLETETRLGRMKVEDFDQAAEFF
SGMVMGHSQLRALLRLPSEKSQEQFGRLAREAAERFMRAYAP
>Mature_201_residues
PRVPGQIDVAKTEAILDAAVEVIGERGLAAPMSAIARHAGVSKQTVYNHYGSKAELMRALMQRRVESITASLREPGAVDN
PTEALEAYARSVLETMITTKSYSMMRVIILGSGEMPDIAQEVFEAGPQNARRQLAAFLETETRLGRMKVEDFDQAAEFFS
GMVMGHSQLRALLRLPSEKSQEQFGRLAREAAERFMRAYAP

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22320; Mature: 22189

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVPGQIDVAKTEAILDAAVEVIGERGLAAPMSAIARHAGVSKQTVYNHYGSKAELMRA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHH
LMQRRVESITASLREPGAVDNPTEALEAYARSVLETMITTKSYSMMRVIILGSGEMPDIA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHH
QEVFEAGPQNARRQLAAFLETETRLGRMKVEDFDQAAEFFSGMVMGHSQLRALLRLPSEK
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SQEQFGRLAREAAERFMRAYAP
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRVPGQIDVAKTEAILDAAVEVIGERGLAAPMSAIARHAGVSKQTVYNHYGSKAELMRA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHH
LMQRRVESITASLREPGAVDNPTEALEAYARSVLETMITTKSYSMMRVIILGSGEMPDIA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHH
QEVFEAGPQNARRQLAAFLETETRLGRMKVEDFDQAAEFFSGMVMGHSQLRALLRLPSEK
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SQEQFGRLAREAAERFMRAYAP
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA