| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is pmi [H]
Identifier: 16127847
GI number: 16127847
Start: 3873410
End: 3874570
Strand: Direct
Name: pmi [H]
Synonym: CC_3617
Alternate gene names: 16127847
Gene position: 3873410-3874570 (Clockwise)
Preceding gene: 16127842
Following gene: 16127850
Centisome position: 96.43
GC content: 68.04
Gene sequence:
>1161_bases ATGACCAACGCTTTCGCCGACGCCGCCCGACTTCGCGACCGCCTGAAGACCTGGGCGGTCGAGGCGGCCTATCCGATCTG GTGGGAGGTCGGCGCTGATCGGGTGAAAGGCGGCTTCTTCGAGAAGATCGATCTGGACGGCCAGGCGGTGGATGGCCCCC GCCGCGGTCGCGTCCTGCCGCGACAGATCTACGCCTATGCGATCGCCGGCGACCTGGGCTGGCGCGGGCCCTGGCGCGCG GCTGTCGAACACGGCCTGGCCTACTTCCTGTCCGCCTATCGTCGATCCGATGGCCAGTTCCGCACCCTTGTGGGCCCGAA CGGCGAGAGCTTAGACGACACCGCCGACCTCTATGACCAGGCCTTCGCCCTGTTCGCCCTGGCGGCGGTCGCCAAGGCGC TGCCCGACCGCGCCGACGACGCGCGGACGCTGGCCCTTGTGGTGCGCGAGCGTCTGATCGCCGAACGCAAGCATCCCGTC GCGGGCTTCCACCAGACGAACCCGCCCTCAGCGCCTCTGCAGTCCAATCCGCACATGCACCTGTTCGAGGCCATGCTGGC CTGGAACGAGATCGATAAGGACCCGATCTGGCGCACCCTGGCCGACGAGATCGCCGAACTGGCGCTCTCCAGGTTCATTC ACGCGCCCAGCGGCCAGATCCGTGAGTTCTTCGACCTCGACTGGAACCCCGCGCCAGGCGTCGCGGGTCGGATCTGCGAG CCGGGGCATCAGTTCGAATGGGGCTGGCTGCTGATGCGCTGGGGCCAGCTTGCCGGCCGCGCCGACGCTACGGCGGCGGC CTTGCGCATGATCGATGACGCCGAGACCCACGGCGTTGACCTATCGCGAGGCGTGGCGATCAACGCCCTGCTCGATGATT TCTCGACCCACGACGACGGCGCCCGACTGTGGCCCCAAACCGAGCGGATCAAGGCGGCCGTGCTGGCGGCGGAGATCACC GGCCAAGCGCGCTACTGGGACATGGCCGCCGCCGCCGCTGAGGGCCTGATGGCCTATCTGCGCACGGCGATCCCCGGCCT CTGGCGCGACAAGTACCAGCCCGACGAAACCTTTATCGAAGAGCCCGTCCCGGCCAGCTCGTTCTACCATATCGCCTTGG CGATCCTGGAGATGGACCGGGTGATCAACGCGGCTTCGTGA
Upstream 100 bases:
>100_bases ATGGCCCGAGCACTAACCCGGCGGGCGCAGAATCGCCAAGCCGACGTCTTGGCCTCGTCACGCAACCTCGCCTAGAAGGG TCACGCCGATGGAGCCTCCG
Downstream 100 bases:
>100_bases CCAGCAAGGTCGCCGCCCCGATCGCCCGAGCCTGAACCGAGTCGTCCAAGGCGATGATCGCGCCCGCAGCATAGACGTCG CCGTCCATCTCGATCACGCC
Product: mannose-6-phosphate isomerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MTNAFADAARLRDRLKTWAVEAAYPIWWEVGADRVKGGFFEKIDLDGQAVDGPRRGRVLPRQIYAYAIAGDLGWRGPWRA AVEHGLAYFLSAYRRSDGQFRTLVGPNGESLDDTADLYDQAFALFALAAVAKALPDRADDARTLALVVRERLIAERKHPV AGFHQTNPPSAPLQSNPHMHLFEAMLAWNEIDKDPIWRTLADEIAELALSRFIHAPSGQIREFFDLDWNPAPGVAGRICE PGHQFEWGWLLMRWGQLAGRADATAAALRMIDDAETHGVDLSRGVAINALLDDFSTHDDGARLWPQTERIKAAVLAAEIT GQARYWDMAAAAAEGLMAYLRTAIPGLWRDKYQPDETFIEEPVPASSFYHIALAILEMDRVINAAS
Sequences:
>Translated_386_residues MTNAFADAARLRDRLKTWAVEAAYPIWWEVGADRVKGGFFEKIDLDGQAVDGPRRGRVLPRQIYAYAIAGDLGWRGPWRA AVEHGLAYFLSAYRRSDGQFRTLVGPNGESLDDTADLYDQAFALFALAAVAKALPDRADDARTLALVVRERLIAERKHPV AGFHQTNPPSAPLQSNPHMHLFEAMLAWNEIDKDPIWRTLADEIAELALSRFIHAPSGQIREFFDLDWNPAPGVAGRICE PGHQFEWGWLLMRWGQLAGRADATAAALRMIDDAETHGVDLSRGVAINALLDDFSTHDDGARLWPQTERIKAAVLAAEIT GQARYWDMAAAAAEGLMAYLRTAIPGLWRDKYQPDETFIEEPVPASSFYHIALAILEMDRVINAAS >Mature_385_residues TNAFADAARLRDRLKTWAVEAAYPIWWEVGADRVKGGFFEKIDLDGQAVDGPRRGRVLPRQIYAYAIAGDLGWRGPWRAA VEHGLAYFLSAYRRSDGQFRTLVGPNGESLDDTADLYDQAFALFALAAVAKALPDRADDARTLALVVRERLIAERKHPVA GFHQTNPPSAPLQSNPHMHLFEAMLAWNEIDKDPIWRTLADEIAELALSRFIHAPSGQIREFFDLDWNPAPGVAGRICEP GHQFEWGWLLMRWGQLAGRADATAAALRMIDDAETHGVDLSRGVAINALLDDFSTHDDGARLWPQTERIKAAVLAAEITG QARYWDMAAAAAEGLMAYLRTAIPGLWRDKYQPDETFIEEPVPASSFYHIALAILEMDRVINAAS
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 [H]
Pfam domain/function: PF07221 GlcNAc_2-epim [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 42929; Mature: 42798
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAFADAARLRDRLKTWAVEAAYPIWWEVGADRVKGGFFEKIDLDGQAVDGPRRGRVLP CCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCEEECCCCCCCCCCCCCCCCH RQIYAYAIAGDLGWRGPWRAAVEHGLAYFLSAYRRSDGQFRTLVGPNGESLDDTADLYDQ HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHH AFALFALAAVAKALPDRADDARTLALVVRERLIAERKHPVAGFHQTNPPSAPLQSNPHMH HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH LFEAMLAWNEIDKDPIWRTLADEIAELALSRFIHAPSGQIREFFDLDWNPAPGVAGRICE HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCC PGHQFEWGWLLMRWGQLAGRADATAAALRMIDDAETHGVDLSRGVAINALLDDFSTHDDG CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCCCEEHHHHHHHHCCCCCC ARLWPQTERIKAAVLAAEITGQARYWDMAAAAAEGLMAYLRTAIPGLWRDKYQPDETFIE CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHC EPVPASSFYHIALAILEMDRVINAAS CCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNAFADAARLRDRLKTWAVEAAYPIWWEVGADRVKGGFFEKIDLDGQAVDGPRRGRVLP CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCEEECCCCCCCCCCCCCCCCH RQIYAYAIAGDLGWRGPWRAAVEHGLAYFLSAYRRSDGQFRTLVGPNGESLDDTADLYDQ HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHH AFALFALAAVAKALPDRADDARTLALVVRERLIAERKHPVAGFHQTNPPSAPLQSNPHMH HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH LFEAMLAWNEIDKDPIWRTLADEIAELALSRFIHAPSGQIREFFDLDWNPAPGVAGRICE HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCC PGHQFEWGWLLMRWGQLAGRADATAAALRMIDDAETHGVDLSRGVAINALLDDFSTHDDG CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCCCEEHHHHHHHHCCCCCC ARLWPQTERIKAAVLAAEITGQARYWDMAAAAAEGLMAYLRTAIPGLWRDKYQPDETFIE CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHC EPVPASSFYHIALAILEMDRVINAAS CCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1452036; 11481430 [H]