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The map label for this gene is ftrA

Identifier: 16127597

GI number: 16127597

Start: 3615740

End: 3616714

Strand: Direct

Name: ftrA

Synonym: CC_3367

Alternate gene names: 16127597

Gene position: 3615740-3616714 (Clockwise)

Preceding gene: 16127595

Following gene: 16127600

Centisome position: 90.01

GC content: 72.21

Gene sequence:

>975_bases
TTGAACGTAAAGATCATGCCAAACGCCTCGCCGCTGGTCGTCGCCCTCGCCTATGACGGCCTGTGCACCTTCGAGTACGG
GGTCGCCGTCGAACTGTTCGCCCTGCCCCGGCCCGAGATGGGCGAGGGGTGGTACCGGTTCGCGACCGCCGCCGTGGAGC
CCGGAGACCTCCGGGGCCTTGGCGGCGTTCACGTCGTCGGCGACGGCGGCCTGGAGCTGCTGGCGGGCGCCAGCATCATC
GTGGCGCCGGGCTGGCGCGGCCTGGACGCTCCGGTTCCCCGGCCCCTGATCGAGGCTCTGCGCGCAGCGCACGCCGGGGG
CGCGCGGCTGATGTCGATCTGTTCAGGCGTCTTCGTGCTGGCCGCGACGGGGCTGTTGGATGGTCGCCGCGCCACGACCC
ACTGGCGCTATGCCGACGCCCTCAGAGCGCATCATCCGGCCATCCAGGTCCAGCCGGATGTGCTCTATGTCGACGAGGGC
GACGTGCTGACCTCGGCCGGCAGCGCCGCAGGCATCGACCTTGGCCTGCACCTGATCCGCCGTGACTTTGGGCCTGAGGC
CGCCAACACCGTCGCGCGCCGCCTGGTCGTGCCGCCGCATCGCGACGGCGGGCAGGCCCAGTTCGTTCAGCGTCCCGTGC
CCGTCGCGCACGAGGCGTCGCGGCTGGGCCCCATTCTGGACCAGATGCGCGCGAATCTGGCGGACGAGCACACCATCAAG
ACGCTGGCGGCCCTGGCCGGCATGAGCGAACGGACCTTCCTGCGGCGGTTCGAGGCGGTTACCGGCGCGACGCCGGCCCG
GTGGCTGCTGGCCGAGCGCCTGAACCACGCGCGCGACCTGCTGGAGACCGCCTCGACCAGCATCGATCAGGTGGCCAGGG
CCGTGGGCCTGGGCGCGCCCGCCCTGCGCCACCACTTCCGCCGCCAGTTCTCGACCACGCCGGGCGCCTATCGCGCACGG
TTCGCCCGGACCTAG

Upstream 100 bases:

>100_bases
CGGCGGGGATGGCGGAAACAAAGCTCATGCGGGCCTCCAACGATTTGACGCCCAGACCTTGCCGCGCCGCCGCTCCTGGC
GTTAGCTGGCCAGATCGACA

Downstream 100 bases:

>100_bases
AGCGTGACGCCGAAAGTGGGAACCGGTTTCGGCGCTAGTCACGCTCTAAGTGTTTGATTTAGATCTTTGTTATCGCGTCA
AAGCGATTCCGTTTCGACGC

Product: transcriptional activator FtrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MNVKIMPNASPLVVALAYDGLCTFEYGVAVELFALPRPEMGEGWYRFATAAVEPGDLRGLGGVHVVGDGGLELLAGASII
VAPGWRGLDAPVPRPLIEALRAAHAGGARLMSICSGVFVLAATGLLDGRRATTHWRYADALRAHHPAIQVQPDVLYVDEG
DVLTSAGSAAGIDLGLHLIRRDFGPEAANTVARRLVVPPHRDGGQAQFVQRPVPVAHEASRLGPILDQMRANLADEHTIK
TLAALAGMSERTFLRRFEAVTGATPARWLLAERLNHARDLLETASTSIDQVARAVGLGAPALRHHFRRQFSTTPGAYRAR
FART

Sequences:

>Translated_324_residues
MNVKIMPNASPLVVALAYDGLCTFEYGVAVELFALPRPEMGEGWYRFATAAVEPGDLRGLGGVHVVGDGGLELLAGASII
VAPGWRGLDAPVPRPLIEALRAAHAGGARLMSICSGVFVLAATGLLDGRRATTHWRYADALRAHHPAIQVQPDVLYVDEG
DVLTSAGSAAGIDLGLHLIRRDFGPEAANTVARRLVVPPHRDGGQAQFVQRPVPVAHEASRLGPILDQMRANLADEHTIK
TLAALAGMSERTFLRRFEAVTGATPARWLLAERLNHARDLLETASTSIDQVARAVGLGAPALRHHFRRQFSTTPGAYRAR
FART
>Mature_324_residues
MNVKIMPNASPLVVALAYDGLCTFEYGVAVELFALPRPEMGEGWYRFATAAVEPGDLRGLGGVHVVGDGGLELLAGASII
VAPGWRGLDAPVPRPLIEALRAAHAGGARLMSICSGVFVLAATGLLDGRRATTHWRYADALRAHHPAIQVQPDVLYVDEG
DVLTSAGSAAGIDLGLHLIRRDFGPEAANTVARRLVVPPHRDGGQAQFVQRPVPVAHEASRLGPILDQMRANLADEHTIK
TLAALAGMSERTFLRRFEAVTGATPARWLLAERLNHARDLLETASTSIDQVARAVGLGAPALRHHFRRQFSTTPGAYRAR
FART

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34707; Mature: 34707

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKIMPNASPLVVALAYDGLCTFEYGVAVELFALPRPEMGEGWYRFATAAVEPGDLRGL
CCEEECCCCCCEEEEEEECCEEEEECCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCC
GGVHVVGDGGLELLAGASIIVAPGWRGLDAPVPRPLIEALRAAHAGGARLMSICSGVFVL
CCEEEECCCCCEEHHCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
AATGLLDGRRATTHWRYADALRAHHPAIQVQPDVLYVDEGDVLTSAGSAAGIDLGLHLIR
HHHHCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEEECCCCEEECCCCCCHHHHHHHHHH
RDFGPEAANTVARRLVVPPHRDGGQAQFVQRPVPVAHEASRLGPILDQMRANLADEHTIK
HHCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
TLAALAGMSERTFLRRFEAVTGATPARWLLAERLNHARDLLETASTSIDQVARAVGLGAP
HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCH
ALRHHFRRQFSTTPGAYRARFART
HHHHHHHHHHCCCCCHHHHHHCCC
>Mature Secondary Structure
MNVKIMPNASPLVVALAYDGLCTFEYGVAVELFALPRPEMGEGWYRFATAAVEPGDLRGL
CCEEECCCCCCEEEEEEECCEEEEECCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCC
GGVHVVGDGGLELLAGASIIVAPGWRGLDAPVPRPLIEALRAAHAGGARLMSICSGVFVL
CCEEEECCCCCEEHHCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
AATGLLDGRRATTHWRYADALRAHHPAIQVQPDVLYVDEGDVLTSAGSAAGIDLGLHLIR
HHHHCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEEECCCCEEECCCCCCHHHHHHHHHH
RDFGPEAANTVARRLVVPPHRDGGQAQFVQRPVPVAHEASRLGPILDQMRANLADEHTIK
HHCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
TLAALAGMSERTFLRRFEAVTGATPARWLLAERLNHARDLLETASTSIDQVARAVGLGAP
HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCH
ALRHHFRRQFSTTPGAYRARFART
HHHHHHHHHHCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]