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The map label for this gene is ycaQ [H]

Identifier: 16127554

GI number: 16127554

Start: 3570584

End: 3571813

Strand: Direct

Name: ycaQ [H]

Synonym: CC_3324

Alternate gene names: 16127554

Gene position: 3570584-3571813 (Clockwise)

Preceding gene: 16127552

Following gene: 16127555

Centisome position: 88.89

GC content: 69.84

Gene sequence:

>1230_bases
ATGGTCGAAACCCTCTCCGCCCCCGAGGCGCGCCGAATTGCGCTGGCGGCGCAGGGCTTCGGACGCCCCCGGCCTGCACA
GCCCGGGAAGCGTCACCTGCTCAACACGATCCAGGCGCTCGGCGTCGTGCAGATCGACTCGGTCAATGTGGTCTCGCGCT
CCCATTATCTGCCGTTCTTCTCCCGCCTGGGCGCCTACGACCGCGCCCTGCTCGAGGACCTCGCCTGGGGGCGCAAGCCC
GCTCTCGCCGAGTACTGGGCGCACGAGGCGTCTCTGACGCCGCTCGCCACCCACCCGCTACTGCGCTGGCGCATGCAGGA
CGCCCGCGACGGCGTGGGGGTCTGGAAGAACGTCGCCAAGTTCCTGCACACCCATGCCGACTTCATCGATCAGGCGCTGA
AGGCCGTCGATCAGCGCGGACCGCTCGCCGCCTCCGAACTGGCGTTGGGCGCGAAGGGCGCGGGCGGCTGGTGGGGCTGG
AGCGAGGGCAAGCGGGCGATGGAGTGCCTGTTCTGGACCGGCCGCCTGACCACCGCCACACGTCGCGGCGCCTTTGAGCG
CGTATACGACCTTCCCGAGCGGGTCCTGCCCAAGGCCATTCACGACGCGCCCACGCCTGATCGGGTTGAGGCCTGCCGTG
CGCTGCTCAGGATCGCCGCCCAGGCCATGGGCGTCGCGACCGAACGCGACCTGCGCGACTATTTCCGCCTTGGCGTGAAC
GATGCGCGCGACGGCGTCGCCGCCTTGGCGGCGGAAGGCGCCCTGGTTGCGGTCAAGGTCGCCGGCTGGGATCAACCGGC
CTATCTCTGGCCCGAGGCCCGGCGTCCACGGGCGATCAAGGCCGCCGCCCTGCTCTCCCCCTTCGACAATCTGATCTGGT
TTCGGGAGCGCGCCGAGCGACTGTTCGACGTGCGCGTGCGCCTTGAGATCTACACGCCCGCCCACAAGCGCACCCACGGC
TACTATGTGCTACCCTTTCTGCAGAACGAGGCGATCACGGCCCGGGTGGACCTCAAGGCGGATCGCAAGGCGGGCCGGCT
TCTGGTCCTCGCGGCGCACGCCGAGTCACGGGCCGACGCGAAGACCCCCCTGGCCCTGGCCGGGGAACTGGCCCTCATGG
CCCATTGGCTTGGCCTTCAAGGCGTCGAAGTCCGGCCGGTCGGCGATCTCGCCCCCGCCTTGGGTTCGGTTGTGGAGCCT
CGCGCCAAAGACGCCTCGACCGGACTGTAA

Upstream 100 bases:

>100_bases
CTATCGCGGCATCGGTAGGGGCGTTCGACGCCGAGGCCAAGCCTCATGGTAGCGGTCTCACCACCTTGCGCGGCCGTCAG
GGCCAAGCTCAACTGGGGCC

Downstream 100 bases:

>100_bases
AGCATTGTAAAAATGCGGCCTCAGGTCGAGCGGGCAAGGGCGGAGCAAGGTACAGATGAACAGCTGGACGCCTGCTTGTC
GCCCCACCGACAGAGAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MVETLSAPEARRIALAAQGFGRPRPAQPGKRHLLNTIQALGVVQIDSVNVVSRSHYLPFFSRLGAYDRALLEDLAWGRKP
ALAEYWAHEASLTPLATHPLLRWRMQDARDGVGVWKNVAKFLHTHADFIDQALKAVDQRGPLAASELALGAKGAGGWWGW
SEGKRAMECLFWTGRLTTATRRGAFERVYDLPERVLPKAIHDAPTPDRVEACRALLRIAAQAMGVATERDLRDYFRLGVN
DARDGVAALAAEGALVAVKVAGWDQPAYLWPEARRPRAIKAAALLSPFDNLIWFRERAERLFDVRVRLEIYTPAHKRTHG
YYVLPFLQNEAITARVDLKADRKAGRLLVLAAHAESRADAKTPLALAGELALMAHWLGLQGVEVRPVGDLAPALGSVVEP
RAKDASTGL

Sequences:

>Translated_409_residues
MVETLSAPEARRIALAAQGFGRPRPAQPGKRHLLNTIQALGVVQIDSVNVVSRSHYLPFFSRLGAYDRALLEDLAWGRKP
ALAEYWAHEASLTPLATHPLLRWRMQDARDGVGVWKNVAKFLHTHADFIDQALKAVDQRGPLAASELALGAKGAGGWWGW
SEGKRAMECLFWTGRLTTATRRGAFERVYDLPERVLPKAIHDAPTPDRVEACRALLRIAAQAMGVATERDLRDYFRLGVN
DARDGVAALAAEGALVAVKVAGWDQPAYLWPEARRPRAIKAAALLSPFDNLIWFRERAERLFDVRVRLEIYTPAHKRTHG
YYVLPFLQNEAITARVDLKADRKAGRLLVLAAHAESRADAKTPLALAGELALMAHWLGLQGVEVRPVGDLAPALGSVVEP
RAKDASTGL
>Mature_409_residues
MVETLSAPEARRIALAAQGFGRPRPAQPGKRHLLNTIQALGVVQIDSVNVVSRSHYLPFFSRLGAYDRALLEDLAWGRKP
ALAEYWAHEASLTPLATHPLLRWRMQDARDGVGVWKNVAKFLHTHADFIDQALKAVDQRGPLAASELALGAKGAGGWWGW
SEGKRAMECLFWTGRLTTATRRGAFERVYDLPERVLPKAIHDAPTPDRVEACRALLRIAAQAMGVATERDLRDYFRLGVN
DARDGVAALAAEGALVAVKVAGWDQPAYLWPEARRPRAIKAAALLSPFDNLIWFRERAERLFDVRVRLEIYTPAHKRTHG
YYVLPFLQNEAITARVDLKADRKAGRLLVLAAHAESRADAKTPLALAGELALMAHWLGLQGVEVRPVGDLAPALGSVVEP
RAKDASTGL

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=359, Percent_Identity=38.1615598885794, Blast_Score=197, Evalue=9e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 45056; Mature: 45056

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVETLSAPEARRIALAAQGFGRPRPAQPGKRHLLNTIQALGVVQIDSVNVVSRSHYLPFF
CCCCCCCCCHHHEEEEHHCCCCCCCCCCHHHHHHHHHHHHCEEEECCEEHHHHCCCCHHH
SRLGAYDRALLEDLAWGRKPALAEYWAHEASLTPLATHPLLRWRMQDARDGVGVWKNVAK
HHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
FLHTHADFIDQALKAVDQRGPLAASELALGAKGAGGWWGWSEGKRAMECLFWTGRLTTAT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
RRGAFERVYDLPERVLPKAIHDAPTPDRVEACRALLRIAAQAMGVATERDLRDYFRLGVN
HHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
DARDGVAALAAEGALVAVKVAGWDQPAYLWPEARRPRAIKAAALLSPFDNLIWFRERAER
CHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LFDVRVRLEIYTPAHKRTHGYYVLPFLQNEAITARVDLKADRKAGRLLVLAAHAESRADA
HHEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCCCCCC
KTPLALAGELALMAHWLGLQGVEVRPVGDLAPALGSVVEPRAKDASTGL
CCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVETLSAPEARRIALAAQGFGRPRPAQPGKRHLLNTIQALGVVQIDSVNVVSRSHYLPFF
CCCCCCCCCHHHEEEEHHCCCCCCCCCCHHHHHHHHHHHHCEEEECCEEHHHHCCCCHHH
SRLGAYDRALLEDLAWGRKPALAEYWAHEASLTPLATHPLLRWRMQDARDGVGVWKNVAK
HHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
FLHTHADFIDQALKAVDQRGPLAASELALGAKGAGGWWGWSEGKRAMECLFWTGRLTTAT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
RRGAFERVYDLPERVLPKAIHDAPTPDRVEACRALLRIAAQAMGVATERDLRDYFRLGVN
HHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
DARDGVAALAAEGALVAVKVAGWDQPAYLWPEARRPRAIKAAALLSPFDNLIWFRERAER
CHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LFDVRVRLEIYTPAHKRTHGYYVLPFLQNEAITARVDLKADRKAGRLLVLAAHAESRADA
HHEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCCCCCC
KTPLALAGELALMAHWLGLQGVEVRPVGDLAPALGSVVEPRAKDASTGL
CCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]