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The map label for this gene is yhhW [C]

Identifier: 16127408

GI number: 16127408

Start: 3425813

End: 3426679

Strand: Direct

Name: yhhW [C]

Synonym: CC_3178

Alternate gene names: 16127408

Gene position: 3425813-3426679 (Clockwise)

Preceding gene: 16127407

Following gene: 16127410

Centisome position: 85.28

GC content: 67.13

Gene sequence:

>867_bases
ATGATCGATCTCGTCTTCGACGCCCGCCGCAAGGATCTCGGCAATTTCGAGGTCGGGCGGGTGCTGCCGTTCCACGCGCA
CCGCATGGTCGGCCCCTTCACCTTTCTCGATCACATGGGTCCTGCCGCCTTCCAGCCCGGCTTTCCCAAGAGCGCCGACG
TGCGCCCGCACCCGCACATCGGCCTGTCGACCCTGACCTATCTGTTCGAGGGCGAGATCACCCACCGCGACAGCGTCGGC
TCGCTGGCGGTGATCAAGCCGCACGAGGTCAACTGGATGACCGCCGGCTCGGGCATCACCCATTCCGAACGCTTCGAAGG
CCTGCGCGAGCATGGCGGGCGCATGGACGGCATGCAGGCCTGGGTGGCGCTACCGACCGAGTTCGAGGAGATCGACCCCA
GCTTCACCCACCACGAAGGTCCCGCCGAACTGCCCTATTACGAGAACGGCGGGCTGAAGGCGCGACTGATCGCCGGCGAG
GCGTTCGGGGCGAAATCGAGCGTGCCGGTCTATTCGCCGCTCTTTTATGTGCACTGGGAACTGGAGCCCGGCGTCACCGC
CGCCCTGCCGGCCGAGTATCCTGAGCGCGCCGCCTACATCGCCGCCGGCCGCGTCGAGGTCGATGGCCGCGAGCTGGTCG
AAGCCCAGATGGCCGTGTTCGCGCCCGGCGAGACGGTGGTGTTCAAGGCCCTCGAACGCTCGACCGTCATGCTGCTGGGC
GGCGAGCCCGTCGGCCCGCGCTTCATCGAGTGGAACTTCGTCTCCTCGTCCAAGGACCGCATCGAGCAGGCCAAGGCCGA
CTGGAAGGCCGGCCGCATGAAGCTGCCCGACCTCGACCATGGCGAGTTCATACCGCTGCCGGAATAG

Upstream 100 bases:

>100_bases
CGCGGCCACCTTCTCCCACAAGGGGAGAAGGGTCGTTTTCAACAAGCGCCCCACACAACTCCCCGCTAAGCTCCAGGTCG
CATAGCCGCCGGAGCCCGCC

Downstream 100 bases:

>100_bases
GGGTCCCGCCGCATTCGCCGCCCCCTGCCCCTCCTACATCGCTCGATGTTTAGCCTGGGTCGCCTCATCCAGGCGCAGGA
ACCTGGCGGCGTTGTTGTAG

Product: pirin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MIDLVFDARRKDLGNFEVGRVLPFHAHRMVGPFTFLDHMGPAAFQPGFPKSADVRPHPHIGLSTLTYLFEGEITHRDSVG
SLAVIKPHEVNWMTAGSGITHSERFEGLREHGGRMDGMQAWVALPTEFEEIDPSFTHHEGPAELPYYENGGLKARLIAGE
AFGAKSSVPVYSPLFYVHWELEPGVTAALPAEYPERAAYIAAGRVEVDGRELVEAQMAVFAPGETVVFKALERSTVMLLG
GEPVGPRFIEWNFVSSSKDRIEQAKADWKAGRMKLPDLDHGEFIPLPE

Sequences:

>Translated_288_residues
MIDLVFDARRKDLGNFEVGRVLPFHAHRMVGPFTFLDHMGPAAFQPGFPKSADVRPHPHIGLSTLTYLFEGEITHRDSVG
SLAVIKPHEVNWMTAGSGITHSERFEGLREHGGRMDGMQAWVALPTEFEEIDPSFTHHEGPAELPYYENGGLKARLIAGE
AFGAKSSVPVYSPLFYVHWELEPGVTAALPAEYPERAAYIAAGRVEVDGRELVEAQMAVFAPGETVVFKALERSTVMLLG
GEPVGPRFIEWNFVSSSKDRIEQAKADWKAGRMKLPDLDHGEFIPLPE
>Mature_288_residues
MIDLVFDARRKDLGNFEVGRVLPFHAHRMVGPFTFLDHMGPAAFQPGFPKSADVRPHPHIGLSTLTYLFEGEITHRDSVG
SLAVIKPHEVNWMTAGSGITHSERFEGLREHGGRMDGMQAWVALPTEFEEIDPSFTHHEGPAELPYYENGGLKARLIAGE
AFGAKSSVPVYSPLFYVHWELEPGVTAALPAEYPERAAYIAAGRVEVDGRELVEAQMAVFAPGETVVFKALERSTVMLLG
GEPVGPRFIEWNFVSSSKDRIEQAKADWKAGRMKLPDLDHGEFIPLPE

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family

Homologues:

Organism=Homo sapiens, GI66363697, Length=235, Percent_Identity=30.2127659574468, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4505823, Length=235, Percent_Identity=30.2127659574468, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3178_CAUCR (P58114)

Other databases:

- EMBL:   AE005673
- PIR:   H87642
- RefSeq:   NP_421972.1
- ProteinModelPortal:   P58114
- SMR:   P58114
- GeneID:   943419
- GenomeReviews:   AE005673_GR
- KEGG:   ccr:CC_3178
- NMPDR:   fig|190650.1.peg.3152
- TIGR:   CC_3178
- HOGENOM:   HBG518911
- OMA:   YLFDGEI
- ProtClustDB:   CLSK891333
- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710
- Gene3D:   G3DSA:2.60.120.10
- PANTHER:   PTHR13903
- PIRSF:   PIRSF006232

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C; SSF51182 RmlC_like_cupin

EC number: NA

Molecular weight: Translated: 31903; Mature: 31903

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLVFDARRKDLGNFEVGRVLPFHAHRMVGPFTFLDHMGPAAFQPGFPKSADVRPHPHI
CEEEEECCCHHCCCCCCCCEECCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
GLSTLTYLFEGEITHRDSVGSLAVIKPHEVNWMTAGSGITHSERFEGLREHGGRMDGMQA
CHHHHHHHHCCCEECCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEE
WVALPTEFEEIDPSFTHHEGPAELPYYENGGLKARLIAGEAFGAKSSVPVYSPLFYVHWE
EEECCCCHHHCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCEECCEEEEEEE
LEPGVTAALPAEYPERAAYIAAGRVEVDGRELVEAQMAVFAPGETVVFKALERSTVMLLG
ECCCCEEECCCCCCCCEEEEEECEEEECHHHHHHHHHEEECCCCCEEEEECCCCEEEEEC
GEPVGPRFIEWNFVSSSKDRIEQAKADWKAGRMKLPDLDHGEFIPLPE
CCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCEECCCC
>Mature Secondary Structure
MIDLVFDARRKDLGNFEVGRVLPFHAHRMVGPFTFLDHMGPAAFQPGFPKSADVRPHPHI
CEEEEECCCHHCCCCCCCCEECCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
GLSTLTYLFEGEITHRDSVGSLAVIKPHEVNWMTAGSGITHSERFEGLREHGGRMDGMQA
CHHHHHHHHCCCEECCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEE
WVALPTEFEEIDPSFTHHEGPAELPYYENGGLKARLIAGEAFGAKSSVPVYSPLFYVHWE
EEECCCCHHHCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCEECCEEEEEEE
LEPGVTAALPAEYPERAAYIAAGRVEVDGRELVEAQMAVFAPGETVVFKALERSTVMLLG
ECCCCEEECCCCCCCCEEEEEECEEEECHHHHHHHHHEEECCCCCEEEEECCCCEEEEEC
GEPVGPRFIEWNFVSSSKDRIEQAKADWKAGRMKLPDLDHGEFIPLPE
CCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647