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The map label for this gene is ytfH [C]

Identifier: 16127342

GI number: 16127342

Start: 3347033

End: 3347986

Strand: Direct

Name: ytfH [C]

Synonym: CC_3112

Alternate gene names: 16127342

Gene position: 3347033-3347986 (Clockwise)

Preceding gene: 16127339

Following gene: 16127346

Centisome position: 83.32

GC content: 68.97

Gene sequence:

>954_bases
ATGGCCCCGCCGACGGCTCCAGACCCTGCCCGGACAGCGCTGGTGCGCCGCAGTTCAGCCGCCCGCGCGCTGAACCTGAT
CGGCGACCGCTGGACCCTGCTCGTGCTCTACGCGGCCTTCATGGGCGTCAAACGCTTCGACGGCTTCGTCGAGATGACCG
GCGTGGCCCGCTCTCTGCTGACCGATCGCCTCAAGCGCCTGGAGACCGGCGGCGTCCTGGCGCGTCGGCTCTATCAGGAC
CGGCCGCCCCGCTCCGAATATCGCCTGACGCCGATGGGTCGCGACCTCTACGACTCGGCGCTGATGCTGCTGGGCTGGGA
GATGCGCTGGCGCTTTGATCCCACCTGCCCCTCGCATCAGATCGTCCACACGACCTGCGGCCAGCCGCTGAAGCCGATCC
TGTGCTGCGCGGCGTGCGGCGAGGCGGTGAAAGTCCGCGACATCACCCTGTCGCCCGGTCCGGACGCCGGCCTCGAGCCC
GCTCCGCGCGCCCGGCACTCGCGCCGCGCGAGCCATGACGACGTCGGCGGCGAGGCGCTGCATCCGATGCTGGAGCGCGG
GATCGAGGTGCTGGGCGACCGCTGGACCGCCCACGTGGTCGCCGGCGCCTTCTATGGCCTGCGCCGGTTCAAGGATTTCC
AGGACGAACTGAAGGTCGCCAGCAACATCCTGACCGACCGCCTCGAACGGCTGGTGGCGCGCCACATGCTCGAGAAGGTC
CGCTACCAGGAAAAGCCCGAGCGCTGGGAATACCGGCTGACCACCGAGGGTCGCGATCTCTTCCCCCTGATCGCCGCCCT
GATGACCTGGGGCGACAAGTGGCTGTCAGGAAACGAGGGTCCGCCGGAAATCCTGACACATCGTTGCGGCGCTCGGCTGG
AGCCGGTGGTGCGGTGTGGTTGTTGCGGCGGCGGTGTCGATACGGGGAATACGCGGATTGAATCCTCCCCCTAG

Upstream 100 bases:

>100_bases
CGCTTGTTTTAGTTAGTCCGATTATACAAGCGACTTGTCCGGAGTCCACGCCGTCGTCGAACATTGACTCGCCAGACCGA
AACGCCCCACCAAGCCCGCC

Downstream 100 bases:

>100_bases
CGGGGGAGGTGTCGCCGCAGGCGACGGAGGGGGAAGTTCTGAGGCGCCTGCCGCCTTCCCCTCTCCGGTCGCTATGCGAC
CACCTCCCCCACAGGGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MAPPTAPDPARTALVRRSSAARALNLIGDRWTLLVLYAAFMGVKRFDGFVEMTGVARSLLTDRLKRLETGGVLARRLYQD
RPPRSEYRLTPMGRDLYDSALMLLGWEMRWRFDPTCPSHQIVHTTCGQPLKPILCCAACGEAVKVRDITLSPGPDAGLEP
APRARHSRRASHDDVGGEALHPMLERGIEVLGDRWTAHVVAGAFYGLRRFKDFQDELKVASNILTDRLERLVARHMLEKV
RYQEKPERWEYRLTTEGRDLFPLIAALMTWGDKWLSGNEGPPEILTHRCGARLEPVVRCGCCGGGVDTGNTRIESSP

Sequences:

>Translated_317_residues
MAPPTAPDPARTALVRRSSAARALNLIGDRWTLLVLYAAFMGVKRFDGFVEMTGVARSLLTDRLKRLETGGVLARRLYQD
RPPRSEYRLTPMGRDLYDSALMLLGWEMRWRFDPTCPSHQIVHTTCGQPLKPILCCAACGEAVKVRDITLSPGPDAGLEP
APRARHSRRASHDDVGGEALHPMLERGIEVLGDRWTAHVVAGAFYGLRRFKDFQDELKVASNILTDRLERLVARHMLEKV
RYQEKPERWEYRLTTEGRDLFPLIAALMTWGDKWLSGNEGPPEILTHRCGARLEPVVRCGCCGGGVDTGNTRIESSP
>Mature_316_residues
APPTAPDPARTALVRRSSAARALNLIGDRWTLLVLYAAFMGVKRFDGFVEMTGVARSLLTDRLKRLETGGVLARRLYQDR
PPRSEYRLTPMGRDLYDSALMLLGWEMRWRFDPTCPSHQIVHTTCGQPLKPILCCAACGEAVKVRDITLSPGPDAGLEPA
PRARHSRRASHDDVGGEALHPMLERGIEVLGDRWTAHVVAGAFYGLRRFKDFQDELKVASNILTDRLERLVARHMLEKVR
YQEKPERWEYRLTTEGRDLFPLIAALMTWGDKWLSGNEGPPEILTHRCGARLEPVVRCGCCGGGVDTGNTRIESSP

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 35512; Mature: 35381

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPTAPDPARTALVRRSSAARALNLIGDRWTLLVLYAAFMGVKRFDGFVEMTGVARSLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDRLKRLETGGVLARRLYQDRPPRSEYRLTPMGRDLYDSALMLLGWEMRWRFDPTCPSHQ
HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCHHHEEEECCCCCCCC
IVHTTCGQPLKPILCCAACGEAVKVRDITLSPGPDAGLEPAPRARHSRRASHDDVGGEAL
EECCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCHHHH
HPMLERGIEVLGDRWTAHVVAGAFYGLRRFKDFQDELKVASNILTDRLERLVARHMLEKV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYQEKPERWEYRLTTEGRDLFPLIAALMTWGDKWLSGNEGPPEILTHRCGARLEPVVRCG
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHCCCCCCHHHHCC
CCGGGVDTGNTRIESSP
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
APPTAPDPARTALVRRSSAARALNLIGDRWTLLVLYAAFMGVKRFDGFVEMTGVARSLL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDRLKRLETGGVLARRLYQDRPPRSEYRLTPMGRDLYDSALMLLGWEMRWRFDPTCPSHQ
HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCHHHEEEECCCCCCCC
IVHTTCGQPLKPILCCAACGEAVKVRDITLSPGPDAGLEPAPRARHSRRASHDDVGGEAL
EECCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCHHHH
HPMLERGIEVLGDRWTAHVVAGAFYGLRRFKDFQDELKVASNILTDRLERLVARHMLEKV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYQEKPERWEYRLTTEGRDLFPLIAALMTWGDKWLSGNEGPPEILTHRCGARLEPVVRCG
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHCCCCCCHHHHCC
CCGGGVDTGNTRIESSP
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]