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The map label for this gene is 16127336

Identifier: 16127336

GI number: 16127336

Start: 3339085

End: 3340194

Strand: Direct

Name: 16127336

Synonym: CC_3106

Alternate gene names: NA

Gene position: 3339085-3340194 (Clockwise)

Preceding gene: 16127335

Following gene: 16127337

Centisome position: 83.12

GC content: 72.07

Gene sequence:

>1110_bases
ATGCAGGCGCTGTGCGACGCTGCCGGCGTGCGCCTGCGGGCGCATGGCAAGACCCACAAGTGTTCGACGCTTGGCCGTCT
GATCATCGAGCGCGGCGCGGTGGGCCTGTGCTGCCAGACCGTCGGCGAGGCCGAGGCCTATGTGGCGGGCGGGATCCAGG
ACGTGTTGGTCACCGCCCCCTCCCCGCCCTGGGGCGCGGCGCGGCTGGCGGCGCTGGCCAAGACCGGCGCGCGGATCGGC
GCGGTCGCCGACGACGAGGGCCAGATCGATCGGCTGTCGGACGCGGCCGTCGCGGCCGGCGTGACGCTGGACCTCGTGGT
GGATCTGGATCTCGGCACCCACCGCGCCGGCGCCTATCCGAAGGACGCCCTGCGGCTGGCGCGCGCCGCCGACGCTGCGC
CCGGGCTGCGGTTCGCCGGGCTGCAGGCCTATCTGGGCCACCTCCAGCACATGGACGACCTTGACCTGCGCAAGTCGGCC
GACGAAGCCGCCTTCGCCACCCTGAAGGCGCTGGTCGCCGAGCTGACCGAAGCAGGCCTTCCCCCGCCGGTTGTGACCGG
CGGCGGCACCGGCACCCACATCTATGACCTGGCCTCCGGCGTCTATACTGAACTACAGGCCGGCTCTTACGCGGTGATGG
ATGTCGAGTACGACGCCTGCGGCGCGCCGGGCGGGCAGGCCTGGGGCTTCGAGCCGGCGATGGCCATCGCCGCCACGGTG
GTCTCGGCCAACCACAAGAGCCATGTCACCGTCGACGCCGGCTTCAAGGCCGTGTCGATGGACGGTCCCCCCGCCCGTGT
CGTGGCGGGCGCCGCGCCGGGCTCGCTCTGGCGGGCCATGGGCGACGAGCATGGCATGATCGCCCACCTGAGCCTGATCG
ACGTGCTGAAGGCCGGCGGCCGCGATCCACTGGGCTTCGACAAGGCCGTCGCCGAAGCCGACGCCGATCCGGCCCGCGCC
TGGCCCGCCGACGCGCCGAGGGTCGGCGACATCGTCTGGCTGCAACCGGGCCACTGCGACCCGACCATCAACCTCTATGA
CGCCCTGCATGTCTGGGACGGCGAGACTCTGGAGCGCTGGGCGGTGGATGGGAGAAGGGTGTCCAAATGA

Upstream 100 bases:

>100_bases
GGTGGAGGGAGACAATATGAACTTTCCGAGCACAGAGCATCTCCCCCAGACCCCGCTGCTCGTCGTCGATCGCGCCGCGC
TGGAGCGAAACCTCGCCCGG

Downstream 100 bases:

>100_bases
TCGTCATCCCGCGACGTGTTCGCGGGACCCATTTTTCCGCCGCAAGTGCAGTGCGGATCGGGACTCTCACATGGAAGCTG
AACCATGGGTCCCGCGCATA

Product: threonine aldolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MQALCDAAGVRLRAHGKTHKCSTLGRLIIERGAVGLCCQTVGEAEAYVAGGIQDVLVTAPSPPWGAARLAALAKTGARIG
AVADDEGQIDRLSDAAVAAGVTLDLVVDLDLGTHRAGAYPKDALRLARAADAAPGLRFAGLQAYLGHLQHMDDLDLRKSA
DEAAFATLKALVAELTEAGLPPPVVTGGGTGTHIYDLASGVYTELQAGSYAVMDVEYDACGAPGGQAWGFEPAMAIAATV
VSANHKSHVTVDAGFKAVSMDGPPARVVAGAAPGSLWRAMGDEHGMIAHLSLIDVLKAGGRDPLGFDKAVAEADADPARA
WPADAPRVGDIVWLQPGHCDPTINLYDALHVWDGETLERWAVDGRRVSK

Sequences:

>Translated_369_residues
MQALCDAAGVRLRAHGKTHKCSTLGRLIIERGAVGLCCQTVGEAEAYVAGGIQDVLVTAPSPPWGAARLAALAKTGARIG
AVADDEGQIDRLSDAAVAAGVTLDLVVDLDLGTHRAGAYPKDALRLARAADAAPGLRFAGLQAYLGHLQHMDDLDLRKSA
DEAAFATLKALVAELTEAGLPPPVVTGGGTGTHIYDLASGVYTELQAGSYAVMDVEYDACGAPGGQAWGFEPAMAIAATV
VSANHKSHVTVDAGFKAVSMDGPPARVVAGAAPGSLWRAMGDEHGMIAHLSLIDVLKAGGRDPLGFDKAVAEADADPARA
WPADAPRVGDIVWLQPGHCDPTINLYDALHVWDGETLERWAVDGRRVSK
>Mature_369_residues
MQALCDAAGVRLRAHGKTHKCSTLGRLIIERGAVGLCCQTVGEAEAYVAGGIQDVLVTAPSPPWGAARLAALAKTGARIG
AVADDEGQIDRLSDAAVAAGVTLDLVVDLDLGTHRAGAYPKDALRLARAADAAPGLRFAGLQAYLGHLQHMDDLDLRKSA
DEAAFATLKALVAELTEAGLPPPVVTGGGTGTHIYDLASGVYTELQAGSYAVMDVEYDACGAPGGQAWGFEPAMAIAATV
VSANHKSHVTVDAGFKAVSMDGPPARVVAGAAPGSLWRAMGDEHGMIAHLSLIDVLKAGGRDPLGFDKAVAEADADPARA
WPADAPRVGDIVWLQPGHCDPTINLYDALHVWDGETLERWAVDGRRVSK

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 38182; Mature: 38182

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALCDAAGVRLRAHGKTHKCSTLGRLIIERGAVGLCCQTVGEAEAYVAGGIQDVLVTAP
CCCHHHHHCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCEEEEEECC
SPPWGAARLAALAKTGARIGAVADDEGQIDRLSDAAVAAGVTLDLVVDLDLGTHRAGAYP
CCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC
KDALRLARAADAAPGLRFAGLQAYLGHLQHMDDLDLRKSADEAAFATLKALVAELTEAGL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCC
PPPVVTGGGTGTHIYDLASGVYTELQAGSYAVMDVEYDACGAPGGQAWGFEPAMAIAATV
CCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHH
VSANHKSHVTVDAGFKAVSMDGPPARVVAGAAPGSLWRAMGDEHGMIAHLSLIDVLKAGG
HHCCCCCEEEEECCCEEEECCCCCCEEEECCCCHHHHHHCCCCCCEEEHHHHHHHHHCCC
RDPLGFDKAVAEADADPARAWPADAPRVGDIVWLQPGHCDPTINLYDALHVWDGETLERW
CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHH
AVDGRRVSK
CCCCCCCCC
>Mature Secondary Structure
MQALCDAAGVRLRAHGKTHKCSTLGRLIIERGAVGLCCQTVGEAEAYVAGGIQDVLVTAP
CCCHHHHHCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCEEEEEECC
SPPWGAARLAALAKTGARIGAVADDEGQIDRLSDAAVAAGVTLDLVVDLDLGTHRAGAYP
CCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC
KDALRLARAADAAPGLRFAGLQAYLGHLQHMDDLDLRKSADEAAFATLKALVAELTEAGL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCC
PPPVVTGGGTGTHIYDLASGVYTELQAGSYAVMDVEYDACGAPGGQAWGFEPAMAIAATV
CCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHH
VSANHKSHVTVDAGFKAVSMDGPPARVVAGAAPGSLWRAMGDEHGMIAHLSLIDVLKAGG
HHCCCCCEEEEECCCEEEECCCCCCEEEECCCCHHHHHHCCCCCCEEEHHHHHHHHHCCC
RDPLGFDKAVAEADADPARAWPADAPRVGDIVWLQPGHCDPTINLYDALHVWDGETLERW
CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHH
AVDGRRVSK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]