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The map label for this gene is yfdH [C]

Identifier: 16127121

GI number: 16127121

Start: 3112348

End: 3113340

Strand: Direct

Name: yfdH [C]

Synonym: CC_2889

Alternate gene names: 16127121

Gene position: 3112348-3113340 (Clockwise)

Preceding gene: 16127120

Following gene: 16127122

Centisome position: 77.48

GC content: 67.37

Gene sequence:

>993_bases
ATGGTTGAGCCCCTCGCGCCCCCCATCTCGCCCCTCCCCGTCACCACGCGCTCGCGTGTGGGCAAGACGCTGTCGATCGT
GGCCCCCTGCTTCAACGAGCAGGAGGTGCTGGACCTGTTCTTCGACCGGATCGACGCCGAGATGGCCAGGCTGGGCGTCG
CCTACGAGGTCGTCTGCGTCAATGACGGCAGCCGCGACCACACCCTGACGGTGCTGCTGCGCCGCCATCAGCGCGACCCG
CGCATCAAGGTCATCAACCTGGCCCGCAACTTCGGCAAGGAGACCGCCCTGTCGGCGGGGCTGGACGCGGCGACCGGCGA
CATGATCGTGCCGATCGACTGCGACCTGCAGGATCCGCCCGAGCTGATCGGCCAGTTCCTGGAGGCCTGGGAGGCCGGCG
CCGATGTGGCCTATGGCGTCCGCGTCGACCGCACGTCCGACGGCTTGCTCAAGCGGGCCACGGCCCAGGGCTTCTACCGG
GCGTTCAACAAGCTGTCCGACGTCGACCTGCCCTACAACGCCGGTGACTACCGGCTGATGGACCGGCGGGTGGTCGAGGT
GCTCAAACAGCTGCCCGAGCGCAACCGCTTCATGAAGGGCCTGTTCGCCTGGGTCGGCTTCAACCAGGTGGCCGTGCCCT
ATGTCCGCCCCGAGCGCGCGGCGGGCACGACCTCGTTCCGCTACTGGAAGCTCTGGAACTTCGCCCTGGACGGCATCACC
TCGTTCAGCAGCGTGCCGATCCGCATCTGGAGCTATGTGGGCCTGATCGCGGGCGTGCTGGCCTGCGGCGTGGCGGGGAT
GATCGTGGTGCGCACCCTGCTCTTCGGCCGCGACGTGCCGGGCTATCCGTCGCTGATGGTGGTGATCCTGATGGGCTTTG
GCCTGCAGATGCTGGCCATCGGCTCGCTGGGCGAATATGTCGCCCGCATCTATCAGGAGGTGAAGAACCGACCGCTTTAC
GTGGTGATGGACCGCTACGGGTTCGACGCGTGA

Upstream 100 bases:

>100_bases
AACCGCGACGCGCGCAACGCCGTGGTGGCCACCCTGCGGGTCAAGGTCGGCTTCTAGCTTCCTCTTCCCCCTGGGCGCGC
AACACGGCTAAACCAGCATT

Downstream 100 bases:

>100_bases
GCGTCAGCACCCTCCTGACCCCCGCGCGGCGGGACTTTCTGATCTCGGCCCTGCGCTACGGGGTGGCGGGCGTGTTCAAC
ACCCTGGTCGGGTTTTCGAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MVEPLAPPISPLPVTTRSRVGKTLSIVAPCFNEQEVLDLFFDRIDAEMARLGVAYEVVCVNDGSRDHTLTVLLRRHQRDP
RIKVINLARNFGKETALSAGLDAATGDMIVPIDCDLQDPPELIGQFLEAWEAGADVAYGVRVDRTSDGLLKRATAQGFYR
AFNKLSDVDLPYNAGDYRLMDRRVVEVLKQLPERNRFMKGLFAWVGFNQVAVPYVRPERAAGTTSFRYWKLWNFALDGIT
SFSSVPIRIWSYVGLIAGVLACGVAGMIVVRTLLFGRDVPGYPSLMVVILMGFGLQMLAIGSLGEYVARIYQEVKNRPLY
VVMDRYGFDA

Sequences:

>Translated_330_residues
MVEPLAPPISPLPVTTRSRVGKTLSIVAPCFNEQEVLDLFFDRIDAEMARLGVAYEVVCVNDGSRDHTLTVLLRRHQRDP
RIKVINLARNFGKETALSAGLDAATGDMIVPIDCDLQDPPELIGQFLEAWEAGADVAYGVRVDRTSDGLLKRATAQGFYR
AFNKLSDVDLPYNAGDYRLMDRRVVEVLKQLPERNRFMKGLFAWVGFNQVAVPYVRPERAAGTTSFRYWKLWNFALDGIT
SFSSVPIRIWSYVGLIAGVLACGVAGMIVVRTLLFGRDVPGYPSLMVVILMGFGLQMLAIGSLGEYVARIYQEVKNRPLY
VVMDRYGFDA
>Mature_330_residues
MVEPLAPPISPLPVTTRSRVGKTLSIVAPCFNEQEVLDLFFDRIDAEMARLGVAYEVVCVNDGSRDHTLTVLLRRHQRDP
RIKVINLARNFGKETALSAGLDAATGDMIVPIDCDLQDPPELIGQFLEAWEAGADVAYGVRVDRTSDGLLKRATAQGFYR
AFNKLSDVDLPYNAGDYRLMDRRVVEVLKQLPERNRFMKGLFAWVGFNQVAVPYVRPERAAGTTSFRYWKLWNFALDGIT
SFSSVPIRIWSYVGLIAGVLACGVAGMIVVRTLLFGRDVPGYPSLMVVILMGFGLQMLAIGSLGEYVARIYQEVKNRPLY
VVMDRYGFDA

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=299, Percent_Identity=49.1638795986622, Blast_Score=305, Evalue=2e-84,
Organism=Escherichia coli, GI1788588, Length=308, Percent_Identity=31.4935064935065, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1787259, Length=93, Percent_Identity=40.8602150537634, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24585265, Length=173, Percent_Identity=32.3699421965318, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 36808; Mature: 36808

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEPLAPPISPLPVTTRSRVGKTLSIVAPCFNEQEVLDLFFDRIDAEMARLGVAYEVVCV
CCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEE
NDGSRDHTLTVLLRRHQRDPRIKVINLARNFGKETALSAGLDAATGDMIVPIDCDLQDPP
CCCCCCHHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHCCCCCCCCCEEEEEECCCCCCH
ELIGQFLEAWEAGADVAYGVRVDRTSDGLLKRATAQGFYRAFNKLSDVDLPYNAGDYRLM
HHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
DRRVVEVLKQLPERNRFMKGLFAWVGFNQVAVPYVRPERAAGTTSFRYWKLWNFALDGIT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SFSSVPIRIWSYVGLIAGVLACGVAGMIVVRTLLFGRDVPGYPSLMVVILMGFGLQMLAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHH
GSLGEYVARIYQEVKNRPLYVVMDRYGFDA
HHHHHHHHHHHHHHHCCCEEEEEECCCCCC
>Mature Secondary Structure
MVEPLAPPISPLPVTTRSRVGKTLSIVAPCFNEQEVLDLFFDRIDAEMARLGVAYEVVCV
CCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEE
NDGSRDHTLTVLLRRHQRDPRIKVINLARNFGKETALSAGLDAATGDMIVPIDCDLQDPP
CCCCCCHHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHCCCCCCCCCEEEEEECCCCCCH
ELIGQFLEAWEAGADVAYGVRVDRTSDGLLKRATAQGFYRAFNKLSDVDLPYNAGDYRLM
HHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
DRRVVEVLKQLPERNRFMKGLFAWVGFNQVAVPYVRPERAAGTTSFRYWKLWNFALDGIT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SFSSVPIRIWSYVGLIAGVLACGVAGMIVVRTLLFGRDVPGYPSLMVVILMGFGLQMLAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHH
GSLGEYVARIYQEVKNRPLYVVMDRYGFDA
HHHHHHHHHHHHHHHCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]