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The map label for this gene is 16127120

Identifier: 16127120

GI number: 16127120

Start: 3111132

End: 3112304

Strand: Direct

Name: 16127120

Synonym: CC_2888

Alternate gene names: NA

Gene position: 3111132-3112304 (Clockwise)

Preceding gene: 16127119

Following gene: 16127121

Centisome position: 77.45

GC content: 70.84

Gene sequence:

>1173_bases
ATGACCAACGGCCGTAACCTCTTCGCCGCATGCGGCGCCCTGGCCCTGCTGGCGGCCGGCGTTGCGACCCCGGCCCTGGC
TGACGACGCCCTGACCCTGAAGGTCGACTACATGGCCGATGTGGCCGGCGTCGTGCGCGGCGGAACCGCCCATAAGGCCC
GCGTGCTCGACAATCTGAAGGTCTCGGCCGATGTCGACCTGGAGAAGGCCCTGGGCTGGTCGGGCGCGACCTTCCGCATG
TCGGCCCTGAACAATTCCGGCGCCATGCCCAATGACGACGCCGGCTCGCTGCAGGGCGTCAACAATATCGAGGTCTCCAA
ACAGCGCGCACGCCTGTTCGAGGCCTTTATCGAGCAGAGCTTCGGCGACGGCCAGGGCTCGGCCCTCGTGGGCCTGTATG
ACGTCAACAGCGAGTTCTACGCCAATGAGAGCGCGGGTCTGCTGATCGCGCCGGCCTTCGGCATCGGCTCTGAGCTGGCG
GCCACCGGCCCCAACGGCCCGTCGATCTTCCCCTCCACCGCCCTGTCGGCGCGCCTGCGCTGGACCACCAAAAGCGGCGG
CTATGTGCAGGGCGCGGTGATCAACGCCCACGCCGGCGTGCCCGGCGATCCGGGCGGCGCGGATTTCAGCTTTGATCACG
GCGTGCTGGCGATCGGCGAGGCGGGCTGGAGCGGCGCCGGCAAGCTGGCGGTCGGCGGCTGGGCCTATTCCAAGCGCCAG
GACGACTGGCGCGACGTCACCGCTGCGGGCGATCCCGTCCCGCGCCGGGCCTACGGCGCCTATGTGCTGGCCGAACGCCG
GATCAAGGGCGGCGAGGATGAGCCGGGCCGGATCACCGCCTTCGCCCGCGCCGGGGTTTCCGACGGCGTCACCAGCCCCT
TCCGGGGCGGCTGGCAGGCCGGGATCCTGATCGAGCAGCCGGTCGCGAGCCGTCCGGCCAGCCAGGCCTCGTTCGGGATC
AACCAGGCGTTCCTGTCGCGCCGCGAGCGGGCCAACGGCTGGGACGCGGGTCTGGACACCGGCCGCACCGAGACGGCGCT
GGAGGCCACCTATGCCGACACCTTCGGCCCCATCACCCTGCAACCGGACCTGCAGTACGTGATCCGGCCGGCCGGAAACC
GCGACGCGCGCAACGCCGTGGTGGCCACCCTGCGGGTCAAGGTCGGCTTCTAG

Upstream 100 bases:

>100_bases
AATGTAAGCACTTGTTAAACCTGATTTTTTACCACGCCTAAGCGCGACTGTAGGACACTGACCGCCTCGAAAGACCCAGA
AGGGGTCCCAAGGGTGGATC

Downstream 100 bases:

>100_bases
CTTCCTCTTCCCCCTGGGCGCGCAACACGGCTAAACCAGCATTATGGTTGAGCCCCTCGCGCCCCCCATCTCGCCCCTCC
CCGTCACCACGCGCTCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Carbohydrate-Selective Porin; Carbohydrate-Selective Porin Oprb; Carbohydrate Porin OprB Family Protein; Carbohydrate-Selective Porin OprB Family; Porin-Like Protein; Carbohydrate Porin; Carbohydrate Porin OprB Family

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MTNGRNLFAACGALALLAAGVATPALADDALTLKVDYMADVAGVVRGGTAHKARVLDNLKVSADVDLEKALGWSGATFRM
SALNNSGAMPNDDAGSLQGVNNIEVSKQRARLFEAFIEQSFGDGQGSALVGLYDVNSEFYANESAGLLIAPAFGIGSELA
ATGPNGPSIFPSTALSARLRWTTKSGGYVQGAVINAHAGVPGDPGGADFSFDHGVLAIGEAGWSGAGKLAVGGWAYSKRQ
DDWRDVTAAGDPVPRRAYGAYVLAERRIKGGEDEPGRITAFARAGVSDGVTSPFRGGWQAGILIEQPVASRPASQASFGI
NQAFLSRRERANGWDAGLDTGRTETALEATYADTFGPITLQPDLQYVIRPAGNRDARNAVVATLRVKVGF

Sequences:

>Translated_390_residues
MTNGRNLFAACGALALLAAGVATPALADDALTLKVDYMADVAGVVRGGTAHKARVLDNLKVSADVDLEKALGWSGATFRM
SALNNSGAMPNDDAGSLQGVNNIEVSKQRARLFEAFIEQSFGDGQGSALVGLYDVNSEFYANESAGLLIAPAFGIGSELA
ATGPNGPSIFPSTALSARLRWTTKSGGYVQGAVINAHAGVPGDPGGADFSFDHGVLAIGEAGWSGAGKLAVGGWAYSKRQ
DDWRDVTAAGDPVPRRAYGAYVLAERRIKGGEDEPGRITAFARAGVSDGVTSPFRGGWQAGILIEQPVASRPASQASFGI
NQAFLSRRERANGWDAGLDTGRTETALEATYADTFGPITLQPDLQYVIRPAGNRDARNAVVATLRVKVGF
>Mature_389_residues
TNGRNLFAACGALALLAAGVATPALADDALTLKVDYMADVAGVVRGGTAHKARVLDNLKVSADVDLEKALGWSGATFRMS
ALNNSGAMPNDDAGSLQGVNNIEVSKQRARLFEAFIEQSFGDGQGSALVGLYDVNSEFYANESAGLLIAPAFGIGSELAA
TGPNGPSIFPSTALSARLRWTTKSGGYVQGAVINAHAGVPGDPGGADFSFDHGVLAIGEAGWSGAGKLAVGGWAYSKRQD
DWRDVTAAGDPVPRRAYGAYVLAERRIKGGEDEPGRITAFARAGVSDGVTSPFRGGWQAGILIEQPVASRPASQASFGIN
QAFLSRRERANGWDAGLDTGRTETALEATYADTFGPITLQPDLQYVIRPAGNRDARNAVVATLRVKVGF

Specific function: Unknown

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40551; Mature: 40419

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNGRNLFAACGALALLAAGVATPALADDALTLKVDYMADVAGVVRGGTAHKARVLDNLK
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHCCE
VSADVDLEKALGWSGATFRMSALNNSGAMPNDDAGSLQGVNNIEVSKQRARLFEAFIEQS
EECCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
FGDGQGSALVGLYDVNSEFYANESAGLLIAPAFGIGSELAATGPNGPSIFPSTALSARLR
CCCCCCCEEEEEEECCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE
WTTKSGGYVQGAVINAHAGVPGDPGGADFSFDHGVLAIGEAGWSGAGKLAVGGWAYSKRQ
EEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCEECCCCC
DDWRDVTAAGDPVPRRAYGAYVLAERRIKGGEDEPGRITAFARAGVSDGVTSPFRGGWQA
CCHHHHCCCCCCCCCHHHCEEEEEEHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEE
GILIEQPVASRPASQASFGINQAFLSRRERANGWDAGLDTGRTETALEATYADTFGPITL
CEEEECCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEHHHCCCCCEEE
QPDLQYVIRPAGNRDARNAVVATLRVKVGF
CCCCEEEEECCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
TNGRNLFAACGALALLAAGVATPALADDALTLKVDYMADVAGVVRGGTAHKARVLDNLK
CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHCCE
VSADVDLEKALGWSGATFRMSALNNSGAMPNDDAGSLQGVNNIEVSKQRARLFEAFIEQS
EECCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
FGDGQGSALVGLYDVNSEFYANESAGLLIAPAFGIGSELAATGPNGPSIFPSTALSARLR
CCCCCCCEEEEEEECCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE
WTTKSGGYVQGAVINAHAGVPGDPGGADFSFDHGVLAIGEAGWSGAGKLAVGGWAYSKRQ
EEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCEECCCCC
DDWRDVTAAGDPVPRRAYGAYVLAERRIKGGEDEPGRITAFARAGVSDGVTSPFRGGWQA
CCHHHHCCCCCCCCCHHHCEEEEEEHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEE
GILIEQPVASRPASQASFGINQAFLSRRERANGWDAGLDTGRTETALEATYADTFGPITL
CEEEECCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEHHHCCCCCEEE
QPDLQYVIRPAGNRDARNAVVATLRVKVGF
CCCCEEEEECCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA