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The map label for this gene is 16126908

Identifier: 16126908

GI number: 16126908

Start: 2893628

End: 2894089

Strand: Direct

Name: 16126908

Synonym: CC_2673

Alternate gene names: NA

Gene position: 2893628-2894089 (Clockwise)

Preceding gene: 16126901

Following gene: 16126910

Centisome position: 72.04

GC content: 62.55

Gene sequence:

>462_bases
TTGGTCGAATTCCTCGTGCGGCCTCTCACTGTCGCTTCCCCGTGGCGTTTCGAGTTTCGTAGAATGGCTGAAGACAAGTC
TCCCGATCCCGTCGACATCCACGTCGGTCGCCGTTTGCGTATGCGTCGCAAGGACCTGGGCTATTCCCAGCAAGCGCTCG
CCGACGCCCTGGGCCTGACCTTCCAGCAAGTTCAGAAGTACGAAGGCGGATCCAACCGGATCAGCGCCAGCAAACTGCAT
GGCGCAGCCATGTTCTTGAAGACACCGGTAGCATTTTTCTTCGAGGGCCTTGAGGATCCGGAGGGTGTCGACGGCACCGC
CGCCGAACTGGCCAACGAGATGGCCAGCTTCTGGTCGCTGCCCGGTGGTCCGGATCTGGCCCGCGCCTTCTCGGCCATCG
AGTCGGTGAGTATGCGCAAGCACCTGCTGGACCTGGCCCGCGCGATCGCCGGCCAGGAGTAG

Upstream 100 bases:

>100_bases
CCCACAGACGAGCCAGGAAGTACAGTTCTCGCCTTTGGGGAATAATCATAATAAGCTAGAATAGTCGTTTCAGACGCCCT
CGACTCCGGTCAAGATAACC

Downstream 100 bases:

>100_bases
CGATCAGGCCGGATCGGCCAAAAGCTCGACGTTCTTGGCACCCGCTTCGGCCAGGGCCGAGATCAGCTCGCTCACCGCAG
TGTCCAGCTCCGCCGCGTCG

Product: Cro/CI family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MVEFLVRPLTVASPWRFEFRRMAEDKSPDPVDIHVGRRLRMRRKDLGYSQQALADALGLTFQQVQKYEGGSNRISASKLH
GAAMFLKTPVAFFFEGLEDPEGVDGTAAELANEMASFWSLPGGPDLARAFSAIESVSMRKHLLDLARAIAGQE

Sequences:

>Translated_153_residues
MVEFLVRPLTVASPWRFEFRRMAEDKSPDPVDIHVGRRLRMRRKDLGYSQQALADALGLTFQQVQKYEGGSNRISASKLH
GAAMFLKTPVAFFFEGLEDPEGVDGTAAELANEMASFWSLPGGPDLARAFSAIESVSMRKHLLDLARAIAGQE
>Mature_153_residues
MVEFLVRPLTVASPWRFEFRRMAEDKSPDPVDIHVGRRLRMRRKDLGYSQQALADALGLTFQQVQKYEGGSNRISASKLH
GAAMFLKTPVAFFFEGLEDPEGVDGTAAELANEMASFWSLPGGPDLARAFSAIESVSMRKHLLDLARAIAGQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 16970; Mature: 16970

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEFLVRPLTVASPWRFEFRRMAEDKSPDPVDIHVGRRLRMRRKDLGYSQQALADALGLT
CCHHHHCCHHCCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHH
FQQVQKYEGGSNRISASKLHGAAMFLKTPVAFFFEGLEDPEGVDGTAAELANEMASFWSL
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
PGGPDLARAFSAIESVSMRKHLLDLARAIAGQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVEFLVRPLTVASPWRFEFRRMAEDKSPDPVDIHVGRRLRMRRKDLGYSQQALADALGLT
CCHHHHCCHHCCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHH
FQQVQKYEGGSNRISASKLHGAAMFLKTPVAFFFEGLEDPEGVDGTAAELANEMASFWSL
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
PGGPDLARAFSAIESVSMRKHLLDLARAIAGQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]