| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is sfsA
Identifier: 16126910
GI number: 16126910
Start: 2895006
End: 2895725
Strand: Direct
Name: sfsA
Synonym: CC_2675
Alternate gene names: 16126910
Gene position: 2895006-2895725 (Clockwise)
Preceding gene: 16126908
Following gene: 16126911
Centisome position: 72.07
GC content: 67.92
Gene sequence:
>720_bases ATGCTGCTGCCGCAACCGCTGATCCATGGTCGTCTGGTGAGCCGCTACAAGCGGTTCTTCGCCGACCTCGTACTGGACGA CGGCCAGGAGATCACCGCCCACTGCCCCAATCCGGGGGCCATGCTGGGGGTGAAGGACGCAGGCCAAGGCGCCTGGGTGT CGTGGTCAGACGATCCCAAGCGCAAGCTGGCCTACACCCTGCAGATGGTCGAGCAGGGAAACGCGCTGGTCGGGATCAAC ACCCTGCTGCCCAACAAGCTGGTGGCCGAGGCCCTGGCGGCGGACGCCCTCCCCGAGCTTTCCGGCTACGCGACCATCAA GCCCGAGGTGAAATACGCCGAAGCCAGCCGCGTCGACTTCCTGCTGACCCACCCCGATCGCCCGCCCTGCTGGCTGGAGG TCAAGAACTGCCACTTCTCGCGCACCCCGGGCCTGGCGGAGTTTCCCGACTGCAAGGCGCAGCGCTCGACCCGGCACCTG GAGGACCTTTCCGCCCAGGTCCGCGAGGGCCATCGGGCCGTGGTGCTGTTCGTCGTCCAGCGCGAGGACTGCGAGACCTT CAGCGCCTGCGCGGAGCTCGACCCGGCGTTCGCGGCGGGGCTGGAGGCGGCGGCCAAGGCCGGGGTGGAGGTGCTGGTCT ATGCGTGTGAAATGGGGACGCAGGCGGTGCGGATCGCGCGGCGCATTTTGTGGAGCCACGCCCACCTAACAGCGATTTAA
Upstream 100 bases:
>100_bases ACTTCAGTCGGTTCGACCAGAAATCCTCATCCTGAGCTTGTCGAAGGACGAGGATTTCCGCAAAGCCAAGCGACTTCTCT CAGCCCGACTTAGGCCTCGC
Downstream 100 bases:
>100_bases GCTGCATTTCGCGCCCGCTGAGCTAACCCTTCTGCAGGCTCGCGAAATGGGGATCGCATGAGGAAGACCGTTCTGGCGCT CGCTGTCGCGGGGCTGGCCC
Product: sugar fermentation stimulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MLLPQPLIHGRLVSRYKRFFADLVLDDGQEITAHCPNPGAMLGVKDAGQGAWVSWSDDPKRKLAYTLQMVEQGNALVGIN TLLPNKLVAEALAADALPELSGYATIKPEVKYAEASRVDFLLTHPDRPPCWLEVKNCHFSRTPGLAEFPDCKAQRSTRHL EDLSAQVREGHRAVVLFVVQREDCETFSACAELDPAFAAGLEAAAKAGVEVLVYACEMGTQAVRIARRILWSHAHLTAI
Sequences:
>Translated_239_residues MLLPQPLIHGRLVSRYKRFFADLVLDDGQEITAHCPNPGAMLGVKDAGQGAWVSWSDDPKRKLAYTLQMVEQGNALVGIN TLLPNKLVAEALAADALPELSGYATIKPEVKYAEASRVDFLLTHPDRPPCWLEVKNCHFSRTPGLAEFPDCKAQRSTRHL EDLSAQVREGHRAVVLFVVQREDCETFSACAELDPAFAAGLEAAAKAGVEVLVYACEMGTQAVRIARRILWSHAHLTAI >Mature_239_residues MLLPQPLIHGRLVSRYKRFFADLVLDDGQEITAHCPNPGAMLGVKDAGQGAWVSWSDDPKRKLAYTLQMVEQGNALVGIN TLLPNKLVAEALAADALPELSGYATIKPEVKYAEASRVDFLLTHPDRPPCWLEVKNCHFSRTPGLAEFPDCKAQRSTRHL EDLSAQVREGHRAVVLFVVQREDCETFSACAELDPAFAAGLEAAAKAGVEVLVYACEMGTQAVRIARRILWSHAHLTAI
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=231, Percent_Identity=38.961038961039, Blast_Score=177, Evalue=4e-46,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_CAUCN (B8H0Z4)
Other databases:
- EMBL: CP001340 - RefSeq: YP_002518130.1 - GeneID: 7330919 - GenomeReviews: CP001340_GR - KEGG: ccs:CCNA_02757 - OMA: NTGSMLN - ProtClustDB: PRK00347 - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 26240; Mature: 26240
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLPQPLIHGRLVSRYKRFFADLVLDDGQEITAHCPNPGAMLGVKDAGQGAWVSWSDDPK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEECCCCHH RKLAYTLQMVEQGNALVGINTLLPNKLVAEALAADALPELSGYATIKPEVKYAEASRVDF HHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHHCCHHHCCCEEECCCCEECCCCCEEE LLTHPDRPPCWLEVKNCHFSRTPGLAEFPDCKAQRSTRHLEDLSAQVREGHRAVVLFVVQ EEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEE REDCETFSACAELDPAFAAGLEAAAKAGVEVLVYACEMGTQAVRIARRILWSHAHLTAI CCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MLLPQPLIHGRLVSRYKRFFADLVLDDGQEITAHCPNPGAMLGVKDAGQGAWVSWSDDPK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEECCCCHH RKLAYTLQMVEQGNALVGINTLLPNKLVAEALAADALPELSGYATIKPEVKYAEASRVDF HHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHHCCHHHCCCEEECCCCEECCCCCEEE LLTHPDRPPCWLEVKNCHFSRTPGLAEFPDCKAQRSTRHLEDLSAQVREGHRAVVLFVVQ EEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEE REDCETFSACAELDPAFAAGLEAAAKAGVEVLVYACEMGTQAVRIARRILWSHAHLTAI CCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA