Click here to switch to the map view.

The map label for this gene is 16126728

Identifier: 16126728

GI number: 16126728

Start: 2700598

End: 2701173

Strand: Direct

Name: 16126728

Synonym: CC_2489

Alternate gene names: NA

Gene position: 2700598-2701173 (Clockwise)

Preceding gene: 16126727

Following gene: 16126730

Centisome position: 67.23

GC content: 72.05

Gene sequence:

>576_bases
ATGGACGCGGCTAAGCGGGGCTTCCCGCCGGTCGTCGACGCCAAGACCTGCGTGCTGATCCTCGGCAGCCTGCCCGGCGA
CGCCTCACTGGCGGCCGGACAGTACTACGGCCATCCGCGCAACGCCTTCTGGCGGTTGATGGAGGGGGTGATCGACGCGC
CTCTCGTCGTGCGCGCCTACGAGGATCGCCTGGTCACGCTGCTGGCGCATGGCGTCGGCCTTTGGGACGTGATCGAGACG
GCGCGTCGGCCCGGCAGCCTGGACGCGGCGATCCGCGAGCCCGCAGCCAACGACCTAATGGCCTTGATCGACACCCTCCC
CGCGCTGCGGCTGGTGGCCTTCAACGGCGGGACCGCAGGGCGGCTGGGCGGCCGTCTCATCGGGACACGGGTCAGCACCC
TGGCCCTCCCCTCCTCCAGCCCCGCCTATGCGGCGCGGACGTTCGCGCAGAAGGCGGCGGCCTGGGCGGCGCTCCGCGAC
GGGCTAGCCGACACCTACAGTCGTCCTCACCCTGAGCCTGTCGAAGGGCCAGGACGGCCACCACGGCGTGGGCGCCCGGC
GCCAAGACAGCCATAG

Upstream 100 bases:

>100_bases
CTGTTCAAGGTGCCCCAGTCGCACTCGGTGGCGCCGGTCGCGCCCTATGCCGGGGCCCTGCGCCTGACGGTCACCGGCTG
GCTGCGCAACGATCCGCCCA

Downstream 100 bases:

>100_bases
AAAAAGGGCCGCCCCGGTTGGGAGCGGCCCCTTGTCTTGTCCAGAGCGACGCTCCGAGCGCCTACTCAGACTTGATCTGC
TCGCGGGCCTGGGCCAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; T/U Mismatch-Specific DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein; Mug GT/U Mismatch-Specific DNA Glycosylase; DNA Glycosylase; G/U Mismatch-Specific DNA Glycosylase; G/U Mismatch-Specific Uracil-DNA Glycosylase; G-T/U Mismatch-Specific DNA Glycosylase-Like; Uracil DNA Glycosylase Superfamily; YjeF-Like Protein; GT/U Mismatch-Specific Uracil/Thymine DNA-Glycosylase

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MDAAKRGFPPVVDAKTCVLILGSLPGDASLAAGQYYGHPRNAFWRLMEGVIDAPLVVRAYEDRLVTLLAHGVGLWDVIET
ARRPGSLDAAIREPAANDLMALIDTLPALRLVAFNGGTAGRLGGRLIGTRVSTLALPSSSPAYAARTFAQKAAAWAALRD
GLADTYSRPHPEPVEGPGRPPRRGRPAPRQP

Sequences:

>Translated_191_residues
MDAAKRGFPPVVDAKTCVLILGSLPGDASLAAGQYYGHPRNAFWRLMEGVIDAPLVVRAYEDRLVTLLAHGVGLWDVIET
ARRPGSLDAAIREPAANDLMALIDTLPALRLVAFNGGTAGRLGGRLIGTRVSTLALPSSSPAYAARTFAQKAAAWAALRD
GLADTYSRPHPEPVEGPGRPPRRGRPAPRQP
>Mature_191_residues
MDAAKRGFPPVVDAKTCVLILGSLPGDASLAAGQYYGHPRNAFWRLMEGVIDAPLVVRAYEDRLVTLLAHGVGLWDVIET
ARRPGSLDAAIREPAANDLMALIDTLPALRLVAFNGGTAGRLGGRLIGTRVSTLALPSSSPAYAARTFAQKAAAWAALRD
GLADTYSRPHPEPVEGPGRPPRRGRPAPRQP

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20262; Mature: 20262

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAAKRGFPPVVDAKTCVLILGSLPGDASLAAGQYYGHPRNAFWRLMEGVIDAPLVVRAY
CCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCHHCCCCHHHHHHHHHHHHCCCHHHHHH
EDRLVTLLAHGVGLWDVIETARRPGSLDAAIREPAANDLMALIDTLPALRLVAFNGGTAG
HHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCH
RLGGRLIGTRVSTLALPSSSPAYAARTFAQKAAAWAALRDGLADTYSRPHPEPVEGPGRP
HHCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PRRGRPAPRQP
CCCCCCCCCCC
>Mature Secondary Structure
MDAAKRGFPPVVDAKTCVLILGSLPGDASLAAGQYYGHPRNAFWRLMEGVIDAPLVVRAY
CCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCHHCCCCHHHHHHHHHHHHCCCHHHHHH
EDRLVTLLAHGVGLWDVIETARRPGSLDAAIREPAANDLMALIDTLPALRLVAFNGGTAG
HHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCH
RLGGRLIGTRVSTLALPSSSPAYAARTFAQKAAAWAALRDGLADTYSRPHPEPVEGPGRP
HHCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PRRGRPAPRQP
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA