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The map label for this gene is yijC [C]

Identifier: 16126443

GI number: 16126443

Start: 2409756

End: 2410403

Strand: Direct

Name: yijC [C]

Synonym: CC_2204

Alternate gene names: 16126443

Gene position: 2409756-2410403 (Clockwise)

Preceding gene: 16126438

Following gene: 16126444

Centisome position: 59.99

GC content: 67.13

Gene sequence:

>648_bases
ATGGTTAGAGTGAGGCCGATGAGCACAGCGACCGCCGAATCCCGCCCCTATCACCATGGCGATCTGAGCCGCGCCCTGAT
CGACGCGGCGCGGAAGATTCTGGAGACCGAGGGTCCCGCCGCCCTGTCCCTGCGGGCGGTCGCGCGGGAAGCCGGCGTCA
GTCCCGCCGCGCCCTATCACCATTTCAAGGACAAGGCCGAGCTGCTGGAAGCCGTGGCCCACGAGGGCTGGCACGAGCTC
GACGCCGCGCTTTCGAAGGCCCGCGGCGAAACCGACAACGCCCGCGACCAGATGACCAATCTGGGCGTGGCCTATGTCTG
CTTCGCGCGCGACAATCCGGCGCTCTATCGCGTGATGTACGACCGCTCGCGAGACAAGGACGCCCTGCCCGACCAGTTGA
AGGATGACGGCGCCTACTGCCAGGTGCGCGACACGATCGCCGAGAACAGCGGCGGCCGCGCCACCGAGATCGATCTGGAG
CTTGCCACCATCGCCGCCTGGTGCGCCGGCCATGGCCTGGCCGAAATGATCAGCTTCAAGCAGTTCGCCCCGCTCAAGGA
CCTGCTCGGCGGCGAGGAAGCCTTCCTGCGCGCCGTCTTCGAGCACCTGGGCATGTTCGCCAAGGTCATCGACCAGGATC
CGGCTTGA

Upstream 100 bases:

>100_bases
CCTCGAAAGTTACGAGGCGATCTGGACAGTGCTTAGATAGCACCAATCTGAACGCCGTCAAGATGGTCTTTACAGCGTTT
AGATGAAATTTTAGAAAGCT

Downstream 100 bases:

>100_bases
CGTTCGTCACCCGGTTCGCGCCTTCCCCCACGGGTTACCTGCATCGCGGCCACGCCTATTCGGCGTTGACCGCCTTCGAG
GCGGCGCGCGTGACGGGCGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Regulatory Protein Tetr; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulator TetR; Transcription Regulator TetR Family Protein; Transcriptional Regulatory Protein; Transcriptional Regulator TetR-Family; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Repressor

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MVRVRPMSTATAESRPYHHGDLSRALIDAARKILETEGPAALSLRAVAREAGVSPAAPYHHFKDKAELLEAVAHEGWHEL
DAALSKARGETDNARDQMTNLGVAYVCFARDNPALYRVMYDRSRDKDALPDQLKDDGAYCQVRDTIAENSGGRATEIDLE
LATIAAWCAGHGLAEMISFKQFAPLKDLLGGEEAFLRAVFEHLGMFAKVIDQDPA

Sequences:

>Translated_215_residues
MVRVRPMSTATAESRPYHHGDLSRALIDAARKILETEGPAALSLRAVAREAGVSPAAPYHHFKDKAELLEAVAHEGWHEL
DAALSKARGETDNARDQMTNLGVAYVCFARDNPALYRVMYDRSRDKDALPDQLKDDGAYCQVRDTIAENSGGRATEIDLE
LATIAAWCAGHGLAEMISFKQFAPLKDLLGGEEAFLRAVFEHLGMFAKVIDQDPA
>Mature_215_residues
MVRVRPMSTATAESRPYHHGDLSRALIDAARKILETEGPAALSLRAVAREAGVSPAAPYHHFKDKAELLEAVAHEGWHEL
DAALSKARGETDNARDQMTNLGVAYVCFARDNPALYRVMYDRSRDKDALPDQLKDDGAYCQVRDTIAENSGGRATEIDLE
LATIAAWCAGHGLAEMISFKQFAPLKDLLGGEEAFLRAVFEHLGMFAKVIDQDPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23564; Mature: 23564

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVRPMSTATAESRPYHHGDLSRALIDAARKILETEGPAALSLRAVAREAGVSPAAPYH
CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHH
HFKDKAELLEAVAHEGWHELDAALSKARGETDNARDQMTNLGVAYVCFARDNPALYRVMY
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEECCCCCEEHEEH
DRSRDKDALPDQLKDDGAYCQVRDTIAENSGGRATEIDLELATIAAWCAGHGLAEMISFK
HCCCCCCCCCHHHHCCCCEEEEHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHH
QFAPLKDLLGGEEAFLRAVFEHLGMFAKVIDQDPA
HCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVRVRPMSTATAESRPYHHGDLSRALIDAARKILETEGPAALSLRAVAREAGVSPAAPYH
CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHH
HFKDKAELLEAVAHEGWHELDAALSKARGETDNARDQMTNLGVAYVCFARDNPALYRVMY
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEECCCCCEEHEEH
DRSRDKDALPDQLKDDGAYCQVRDTIAENSGGRATEIDLELATIAAWCAGHGLAEMISFK
HCCCCCCCCCHHHHCCCCEEEEHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHH
QFAPLKDLLGGEEAFLRAVFEHLGMFAKVIDQDPA
HCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA