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The map label for this gene is ygaD [C]

Identifier: 16126338

GI number: 16126338

Start: 2309173

End: 2309643

Strand: Direct

Name: ygaD [C]

Synonym: CC_2099

Alternate gene names: 16126338

Gene position: 2309173-2309643 (Clockwise)

Preceding gene: 16126337

Following gene: 16126339

Centisome position: 57.49

GC content: 69.0

Gene sequence:

>471_bases
GTGACCCTGATCGAAGAGGTCGCCGCGCTGTTGAAGGCGCGGGGCGAAACCATCGCCGTGTCCGAGTCCTCCACCGGCGG
ATTGATCTCGGCCGCCCTGCTGAGCGTCGGCGGCGCTTCGGCGTACTATCGCGGCGGCGCGATCGTCTACACGCCCAAGG
CACGCGCCGCGCTGATGGGGGTGACCAAGGACGAGATGGGCGAGATGCGCTCGGCCAGCGAGCCCTACGCCCAGTTCATG
GCGCGCACCGTGCGCGAGCGCATGGCCTCCACCTGGGGCCTGGCCGAGACCGGCGCGACCGGTCCGTCCGGCAACGCCTA
TGGCGACGCCGCCGGTCATTGCTGCCTTGCGGTCTTCGGTCCCGTCGAGATGAGTCTGGTGATCGAGACGGGTCACGGTG
ATCGCGCCGCCAATATGGCGGCCTTCCGCGACGCGGCGCTGAAGCTCCTGCTCGAAGCGTTGAAGTCCTAG

Upstream 100 bases:

>100_bases
ACCAGGCCCTGGACGCGGCGCGCCAGGAAACCCGTCGCTACGCCAAGCGCCAGTTGACCTGGTTCCGCAATCAAACGCCC
GACTGGGAAAGGATCGTCCC

Downstream 100 bases:

>100_bases
CTTCGCGAGCATCCCCTTCCGATCAACGTTTCGCACCGATCAGAGGACGTTCCAGCGAGAAAAATCGCCGCGCCAGGTAC
CGTCGCGCCGCCACATTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTLIEEVAALLKARGETIAVSESSTGGLISAALLSVGGASAYYRGGAIVYTPKARAALMGVTKDEMGEMRSASEPYAQFM
ARTVRERMASTWGLAETGATGPSGNAYGDAAGHCCLAVFGPVEMSLVIETGHGDRAANMAAFRDAALKLLLEALKS

Sequences:

>Translated_156_residues
MTLIEEVAALLKARGETIAVSESSTGGLISAALLSVGGASAYYRGGAIVYTPKARAALMGVTKDEMGEMRSASEPYAQFM
ARTVRERMASTWGLAETGATGPSGNAYGDAAGHCCLAVFGPVEMSLVIETGHGDRAANMAAFRDAALKLLLEALKS
>Mature_155_residues
TLIEEVAALLKARGETIAVSESSTGGLISAALLSVGGASAYYRGGAIVYTPKARAALMGVTKDEMGEMRSASEPYAQFMA
RTVRERMASTWGLAETGATGPSGNAYGDAAGHCCLAVFGPVEMSLVIETGHGDRAANMAAFRDAALKLLLEALKS

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=117, Percent_Identity=29.9145299145299, Blast_Score=63, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 16093; Mature: 15961

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIEEVAALLKARGETIAVSESSTGGLISAALLSVGGASAYYRGGAIVYTPKARAALMG
CCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEECCCEEEECCCHHHHHHC
VTKDEMGEMRSASEPYAQFMARTVRERMASTWGLAETGATGPSGNAYGDAAGHCCLAVFG
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
PVEMSLVIETGHGDRAANMAAFRDAALKLLLEALKS
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLIEEVAALLKARGETIAVSESSTGGLISAALLSVGGASAYYRGGAIVYTPKARAALMG
CHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEECCCEEEECCCHHHHHHC
VTKDEMGEMRSASEPYAQFMARTVRERMASTWGLAETGATGPSGNAYGDAAGHCCLAVFG
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
PVEMSLVIETGHGDRAANMAAFRDAALKLLLEALKS
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]