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The map label for this gene is flaD

Identifier: 16126304

GI number: 16126304

Start: 2276340

End: 2277143

Strand: Direct

Name: flaD

Synonym: CC_2065

Alternate gene names: 16126304

Gene position: 2276340-2277143 (Clockwise)

Preceding gene: 16126303

Following gene: 16126305

Centisome position: 56.67

GC content: 70.27

Gene sequence:

>804_bases
ATGAAGGCCTTCCTCTTCGCCGCCGCAGCCACCCTGGTGATCACCGCCCTGTCGGCGCCCGCCTTCGCTGGAACGCCCGT
GACCCTGCGGATGGACACCACCGACGCCGACGGCCGCATCACGCTGGGCGATCTCTTCGACGGCGTCAGCGGCCCCGCCG
CCAACGTCGTGGTCGCCGCACGCATGAGCGCCACCGCCGTGCTCGAAGCCGGTCAGGTGCAGATGTCGGCCCGCCGCGCG
GGCTACGTCTGGACCAACGCCAACGGCGTGCGCCGGATCATCGTTCGCGAAGGCGTCGATAATGGCGGCGTCTCGTCGAG
CGCCGCCCCCGGTGCTCAGCTGGCCGGCGCGCGTCTGGCCGGCGCCCCGCGCGCCAATGTGGAAGTTCTTGCCTACGCCC
GCAGCCTGTCGGCCGGCGAAATCGTCCAGCCGCAGGATCTCATCTGGGTGAAGATGGCCGGCGCCCCGGCCGATGCGCCG
CGCGACGCCGACGCCGTGATCGGCCTCGCCGCCAAGCGTCCCCTGCGGGAAGGAGCTCCCGTCGGGATGAAGGATGTGGC
CGCCGCCCAGGTCATCAAGAGCGGCGACTTGATCACCATCACCTATGAAGACGGCGGAATCTCCCTGTCACTGCAGGGCA
AGGCCATGGCCGCCGCCGCCGCCGGTGATGTGTTCGCCGTTCAGAACACTCTGTCGAAGAAGATCATCCAGGCTGTGGCC
GTCGGCCCCGGCGCCGCCGCTGTCGGCCCGCAGGCCCAGAGCTTGCAAGCCCGCTCGCAACCCCTCCGTTTCGCCGCTCG
CTAA

Upstream 100 bases:

>100_bases
GCCCTGATCACCGCCCAGCGCGCCTACGAGATGAACTCGAAGGTGATCTCGACGGCCGACCAGATGCTGCAAGCCACCTC
GCAACTGCGGTCGTAAGCTC

Downstream 100 bases:

>100_bases
GAGGTCCAGATCATGCGTCGTCCTGCTATCCTCGCCGCCGCCGTCCTCCTGGCCCCGCTGGCCGCCTGCTCGACCGTCAA
GGAGGCCGTCAAGGGTCCGG

Product: distal basal-body ring component protein FlaD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKAFLFAAAATLVITALSAPAFAGTPVTLRMDTTDADGRITLGDLFDGVSGPAANVVVAARMSATAVLEAGQVQMSARRA
GYVWTNANGVRRIIVREGVDNGGVSSSAAPGAQLAGARLAGAPRANVEVLAYARSLSAGEIVQPQDLIWVKMAGAPADAP
RDADAVIGLAAKRPLREGAPVGMKDVAAAQVIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLSKKIIQAVA
VGPGAAAVGPQAQSLQARSQPLRFAAR

Sequences:

>Translated_267_residues
MKAFLFAAAATLVITALSAPAFAGTPVTLRMDTTDADGRITLGDLFDGVSGPAANVVVAARMSATAVLEAGQVQMSARRA
GYVWTNANGVRRIIVREGVDNGGVSSSAAPGAQLAGARLAGAPRANVEVLAYARSLSAGEIVQPQDLIWVKMAGAPADAP
RDADAVIGLAAKRPLREGAPVGMKDVAAAQVIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLSKKIIQAVA
VGPGAAAVGPQAQSLQARSQPLRFAAR
>Mature_267_residues
MKAFLFAAAATLVITALSAPAFAGTPVTLRMDTTDADGRITLGDLFDGVSGPAANVVVAARMSATAVLEAGQVQMSARRA
GYVWTNANGVRRIIVREGVDNGGVSSSAAPGAQLAGARLAGAPRANVEVLAYARSLSAGEIVQPQDLIWVKMAGAPADAP
RDADAVIGLAAKRPLREGAPVGMKDVAAAQVIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLSKKIIQAVA
VGPGAAAVGPQAQSLQARSQPLRFAAR

Specific function: FlaD might be the structural protein of the distal basal body ring P, or it is necessary for the assembly of the P ring

COG id: COG1261

COG function: function code NO; Flagellar basal body P-ring biosynthesis protein

Gene ontology:

Cell location: Periplasm (Probable). Bacterial flagellum basal body (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLAD_CAUCR (P12634)

Other databases:

- EMBL:   M21853
- EMBL:   AE005673
- EMBL:   S52478
- PIR:   A32353
- RefSeq:   NP_420868.1
- ProteinModelPortal:   P12634
- GeneID:   942987
- GenomeReviews:   AE005673_GR
- KEGG:   ccr:CC_2065
- NMPDR:   fig|190650.1.peg.2048
- TIGR:   CC_2065
- HOGENOM:   HBG400035
- OMA:   QISARRA
- ProtClustDB:   CLSK890757
- InterPro:   IPR017585
- InterPro:   IPR013974
- SMART:   SM00858
- TIGRFAMs:   TIGR03170

Pfam domain/function: PF08666 SAF

EC number: NA

Molecular weight: Translated: 26926; Mature: 26926

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFLFAAAATLVITALSAPAFAGTPVTLRMDTTDADGRITLGDLFDGVSGPAANVVVAA
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEHHHHHCCCCCCCCCEEEEE
RMSATAVLEAGQVQMSARRAGYVWTNANGVRRIIVREGVDNGGVSSSAAPGAQLAGARLA
ECCCEEEECCCCEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCEEC
GAPRANVEVLAYARSLSAGEIVQPQDLIWVKMAGAPADAPRDADAVIGLAAKRPLREGAP
CCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCHHEEEHHHCCCCCCCCC
VGMKDVAAAQVIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLSKKIIQAVA
CCHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCEEEEHHCCCCHHHHHHHHHHHHHHHH
VGPGAAAVGPQAQSLQARSQPLRFAAR
CCCCCCCCCCCHHHHHHHCCCEEECCC
>Mature Secondary Structure
MKAFLFAAAATLVITALSAPAFAGTPVTLRMDTTDADGRITLGDLFDGVSGPAANVVVAA
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEHHHHHCCCCCCCCCEEEEE
RMSATAVLEAGQVQMSARRAGYVWTNANGVRRIIVREGVDNGGVSSSAAPGAQLAGARLA
ECCCEEEECCCCEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCEEC
GAPRANVEVLAYARSLSAGEIVQPQDLIWVKMAGAPADAPRDADAVIGLAAKRPLREGAP
CCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCHHEEEHHHCCCCCCCCC
VGMKDVAAAQVIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLSKKIIQAVA
CCHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCEEEEHHCCCCHHHHHHHHHHHHHHHH
VGPGAAAVGPQAQSLQARSQPLRFAAR
CCCCCCCCCCCHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2842303; 11259647; 1474584