| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is ampC [H]
Identifier: 16125950
GI number: 16125950
Start: 1879282
End: 1880520
Strand: Direct
Name: ampC [H]
Synonym: CC_1706
Alternate gene names: 16125950
Gene position: 1879282-1880520 (Clockwise)
Preceding gene: 16125949
Following gene: 16125958
Centisome position: 46.78
GC content: 67.47
Gene sequence:
>1239_bases GTGGCCGTCGGCGCGGCGGTGCTGCTGCTGCTGCTTCTCGGCGCGATGCTCCTGCCGCGCACCACCGGTCGCCTGACGAG CGCGCCGCATGGTCTGGCCGCCGCGCCCGCGCCGCCCGAGCGGCCGCAAGACTGGCGGGGCGACATCGATTATCGCGCCA TGGACAGCCGCCTGCGGGCGATGATGACCGATCGGTCGATGCAGGGACTGGCGGTCGCCGTCGTCGAGAAGGGGCGACTT TCCTTCGTTCAGGGCTATGGCGTCACAGCAGAGGGCGGGGCGCCGGTGGATGCGCGGACCGTGTTCCGCTGGGCCTCGCT GTCGAAAACCGTCGCGGGAACCCTGACCGCCCGATTGGCGGCCGATGGCGCGCTATCACTTCAGGATCCGCTTTCGGCGT TCGACACCAGTCTGAAGCTGCCCGGCGACGCGCAGGTGGGCTTGACGCTGGAGCAACTGCTTTCCCAGCGCACGGGCCTG GGTCGCAACGCCTACGATGGTCGGCTGGAGGACGGGGAGGACCCGAACGTCATTCGCGGATCGTTCGCGGCGCTGAAGCC GGTGTGTCCGCCCGGGACCTGTCACACCTATCAGAACATCGCCTATGACACGATCACCGAGGTGATCCACGCGCGCACCG GTCTAGACTATGCCGAAGCGGTCAAACGCCGCCTGTTCGAGCCGCTGGGCATGAAGAGCACGACTTTCGGGGAGGCCGGT TTGAAGTCCTCGGCCCAATGGGCCAGGCCGACGCGTCACGGTCGTGCGCTGCCGTTCTCTGATGCGTACTATCACGTGCC GGCTGCAGCGGGGGTGAACTCGACGATCGTGGACCTGGCGATCTGGATGCAGGCCCAGATGGGGTTGCGGCCCGACGTGC TGTCGCCGTCCGTACTGGGCGAGGTTCAACGGTCCCGGGTCGGCACCGGGCGTCCCTACGGCCGCCTCAATATCGCGCGG GAGCTCAAGGGACCGGGCTATGGCCTTGGCATGCGCAGCTTCACCTACCGCGGTCACGATCTGGTCGGCCACAGCGGCGG GGTGGCGGGGTATCGCGCGACCATGATGTTCGAGCCGGCGACGCGGACGGGCATCGTCATGCTGTGGAACAGCGACGCCA ACCTGCCGTTCCGCTACCAGGCCGAGTTCTTTGACCGCGTCTACGGGCTGCCCTTCACCGATTTTCTCGAGCTGGATCGG GGTGATCCGATGCCGAGTGGCTCAGAACTGGCGGACTAG
Upstream 100 bases:
>100_bases CGAGTCGGCGCGTCGCTGATTTGCCCCCGAACCGCCGCAGGATCCCGTGCCCAAAATCGACCCCGAGCGCGTCGAGGTCA GCAAGCCGCATCGCATCTGG
Downstream 100 bases:
>100_bases CCGGGGTAGACGCGGTCAGGAAGCCTGAGCGATCAATGGGCGAACTGGGAAAGCGCACCGCCGGCGGCCAGGCCCAGAGC GCAGAAGATGCCGAGATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Cephalosporinase [H]
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MAVGAAVLLLLLLGAMLLPRTTGRLTSAPHGLAAAPAPPERPQDWRGDIDYRAMDSRLRAMMTDRSMQGLAVAVVEKGRL SFVQGYGVTAEGGAPVDARTVFRWASLSKTVAGTLTARLAADGALSLQDPLSAFDTSLKLPGDAQVGLTLEQLLSQRTGL GRNAYDGRLEDGEDPNVIRGSFAALKPVCPPGTCHTYQNIAYDTITEVIHARTGLDYAEAVKRRLFEPLGMKSTTFGEAG LKSSAQWARPTRHGRALPFSDAYYHVPAAAGVNSTIVDLAIWMQAQMGLRPDVLSPSVLGEVQRSRVGTGRPYGRLNIAR ELKGPGYGLGMRSFTYRGHDLVGHSGGVAGYRATMMFEPATRTGIVMLWNSDANLPFRYQAEFFDRVYGLPFTDFLELDR GDPMPSGSELAD
Sequences:
>Translated_412_residues MAVGAAVLLLLLLGAMLLPRTTGRLTSAPHGLAAAPAPPERPQDWRGDIDYRAMDSRLRAMMTDRSMQGLAVAVVEKGRL SFVQGYGVTAEGGAPVDARTVFRWASLSKTVAGTLTARLAADGALSLQDPLSAFDTSLKLPGDAQVGLTLEQLLSQRTGL GRNAYDGRLEDGEDPNVIRGSFAALKPVCPPGTCHTYQNIAYDTITEVIHARTGLDYAEAVKRRLFEPLGMKSTTFGEAG LKSSAQWARPTRHGRALPFSDAYYHVPAAAGVNSTIVDLAIWMQAQMGLRPDVLSPSVLGEVQRSRVGTGRPYGRLNIAR ELKGPGYGLGMRSFTYRGHDLVGHSGGVAGYRATMMFEPATRTGIVMLWNSDANLPFRYQAEFFDRVYGLPFTDFLELDR GDPMPSGSELAD >Mature_411_residues AVGAAVLLLLLLGAMLLPRTTGRLTSAPHGLAAAPAPPERPQDWRGDIDYRAMDSRLRAMMTDRSMQGLAVAVVEKGRLS FVQGYGVTAEGGAPVDARTVFRWASLSKTVAGTLTARLAADGALSLQDPLSAFDTSLKLPGDAQVGLTLEQLLSQRTGLG RNAYDGRLEDGEDPNVIRGSFAALKPVCPPGTCHTYQNIAYDTITEVIHARTGLDYAEAVKRRLFEPLGMKSTTFGEAGL KSSAQWARPTRHGRALPFSDAYYHVPAAAGVNSTIVDLAIWMQAQMGLRPDVLSPSVLGEVQRSRVGTGRPYGRLNIARE LKGPGYGLGMRSFTYRGHDLVGHSGGVAGYRATMMFEPATRTGIVMLWNSDANLPFRYQAEFFDRVYGLPFTDFLELDRG DPMPSGSELAD
Specific function: This protein is a serine beta-lactamase with a substrate specificity for cephalosporins [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-C beta-lactamase family [H]
Homologues:
Organism=Escherichia coli, GI1790593, Length=361, Percent_Identity=25.207756232687, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001586 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 44435; Mature: 44304
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGAAVLLLLLLGAMLLPRTTGRLTSAPHGLAAAPAPPERPQDWRGDIDYRAMDSRLRA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH MMTDRSMQGLAVAVVEKGRLSFVQGYGVTAEGGAPVDARTVFRWASLSKTVAGTLTARLA HHHCCCCCCEEEEEECCCCEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ADGALSLQDPLSAFDTSLKLPGDAQVGLTLEQLLSQRTGLGRNAYDGRLEDGEDPNVIRG CCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEC SFAALKPVCPPGTCHTYQNIAYDTITEVIHARTGLDYAEAVKRRLFEPLGMKSTTFGEAG CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC LKSSAQWARPTRHGRALPFSDAYYHVPAAAGVNSTIVDLAIWMQAQMGLRPDVLSPSVLG CCCCCHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH EVQRSRVGTGRPYGRLNIARELKGPGYGLGMRSFTYRGHDLVGHSGGVAGYRATMMFEPA HHHHHHCCCCCCCCCEEHHHHHCCCCCCCCCHHEEECCCEECCCCCCCCCEEEEEEECCC TRTGIVMLWNSDANLPFRYQAEFFDRVYGLPFTDFLELDRGDPMPSGSELAD CCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AVGAAVLLLLLLGAMLLPRTTGRLTSAPHGLAAAPAPPERPQDWRGDIDYRAMDSRLRA CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH MMTDRSMQGLAVAVVEKGRLSFVQGYGVTAEGGAPVDARTVFRWASLSKTVAGTLTARLA HHHCCCCCCEEEEEECCCCEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ADGALSLQDPLSAFDTSLKLPGDAQVGLTLEQLLSQRTGLGRNAYDGRLEDGEDPNVIRG CCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEC SFAALKPVCPPGTCHTYQNIAYDTITEVIHARTGLDYAEAVKRRLFEPLGMKSTTFGEAG CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC LKSSAQWARPTRHGRALPFSDAYYHVPAAAGVNSTIVDLAIWMQAQMGLRPDVLSPSVLG CCCCCHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH EVQRSRVGTGRPYGRLNIARELKGPGYGLGMRSFTYRGHDLVGHSGGVAGYRATMMFEPA HHHHHHCCCCCCCCCEEHHHHHCCCCCCCCCHHEEECCCEECCCCCCCCCEEEEEEECCC TRTGIVMLWNSDANLPFRYQAEFFDRVYGLPFTDFLELDRGDPMPSGSELAD CCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6795623; 7610040; 9278503; 7041115; 9819201; 10595535; 11478888; 12144785; 12526668 [H]