BacMap

Definition	Caulobacter crescentus CB15 chromosome, complete genome.
Accession	NC_002696
Length	4,016,947

Click here to switch to the map view.

The map label for this gene is rhlG [H]

Identifier: 16125818

GI number: 16125818

Start: 1736933

End: 1737700

Strand: Direct

Name: rhlG [H]

Synonym: CC_1571

Alternate gene names: 16125818

Gene position: 1736933-1737700 (Clockwise)

Preceding gene: 16125817

Following gene: 16125821

Centisome position: 43.24

GC content: 67.97

Gene sequence:

>768_bases
ATGCAGAACCTGTTTTCGCTTGAGGGCCGCGTGGCCCTGGTCACCGGCGGCTCGCGCGGTATCGGCGCGATGATCGTCAA
GGGTTTCCTGACGCACGGCGCCAAGCGCGTCTACATCACCGCTCGCAAGGCCGCCGCCTGTGACGCCGCCGCCGAGGAAC
TGAGCCAGTACGGCGAGTGCGTCTCGCTGCCGGGCGATGTCTCGACCATGGAAGGTATCCAGGGCCTGGCGGCCCGCATC
AAGGAGCGCGAGCCCAAGCTCGACATCCTGGTCAACAACGCCGGCGCCGCCTGGGGCGCGGGCTTTGACGAGTTCCCCGA
GAGCGGCTGGGACAAGACCGTCGACCTGAACATGAAGACGCCGTTCTTCCTGACCCAGGCCCTGATCGGCGAACTGCGCG
CCGCAGCCAAGGACCGTGTCGCCAAGGTGATCAACATCGCGTCGATCGACGGCCAGTCGGTGACCAAGGACGAGACCTAT
CCCTATGGCGCCTCCAAGGCCGGCCTGCTGCACATGACCAAGCGCATGGCCCTGCGTCTGGCGCCGGAGAACATCGCCGT
CAGTTGCATCGCGCCGGGCGCCTTCGCCTCGGACATGAACAAGGTCGCCCGCGACCACGCCGACGCCGTGGCCAAGATGA
TCCCCGCCGGCCGCATCGGCGAGGCCGAGGACATGGCGGGCGCGGCCATCTATCTGGCCTCGCGCGCCGGTGACTATGTG
ATGGGCGGTGCGGTGACCGTCGACGGCGGCGTCAGCTTCGCGCGGTGA

Upstream 100 bases:

>100_bases
CGCCCACGACATCATCGACGAGACGGTCGCCCAGTTTCACCAGATCACCGGGCGTCTCGGCGCCCTGGCCGCGGCTCGCG
GCTTCTAGAGGACGAAGACT

Downstream 100 bases:

>100_bases
TCGGTCAGACGCTCCCCGTTCTTCCCGAGCGGGGAGCGTCTAATCCAGGTCTTCTATGTCCGCCGGCTGGGCGTCGCTGA
GCGGCAGGTCGCAGGCGTCC

Product: gluconate 5-dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MQNLFSLEGRVALVTGGSRGIGAMIVKGFLTHGAKRVYITARKAAACDAAAEELSQYGECVSLPGDVSTMEGIQGLAARI
KEREPKLDILVNNAGAAWGAGFDEFPESGWDKTVDLNMKTPFFLTQALIGELRAAAKDRVAKVINIASIDGQSVTKDETY
PYGASKAGLLHMTKRMALRLAPENIAVSCIAPGAFASDMNKVARDHADAVAKMIPAGRIGEAEDMAGAAIYLASRAGDYV
MGGAVTVDGGVSFAR

Sequences:

>Translated_255_residues
MQNLFSLEGRVALVTGGSRGIGAMIVKGFLTHGAKRVYITARKAAACDAAAEELSQYGECVSLPGDVSTMEGIQGLAARI
KEREPKLDILVNNAGAAWGAGFDEFPESGWDKTVDLNMKTPFFLTQALIGELRAAAKDRVAKVINIASIDGQSVTKDETY
PYGASKAGLLHMTKRMALRLAPENIAVSCIAPGAFASDMNKVARDHADAVAKMIPAGRIGEAEDMAGAAIYLASRAGDYV
MGGAVTVDGGVSFAR
>Mature_255_residues
MQNLFSLEGRVALVTGGSRGIGAMIVKGFLTHGAKRVYITARKAAACDAAAEELSQYGECVSLPGDVSTMEGIQGLAARI
KEREPKLDILVNNAGAAWGAGFDEFPESGWDKTVDLNMKTPFFLTQALIGELRAAAKDRVAKVINIASIDGQSVTKDETY
PYGASKAGLLHMTKRMALRLAPENIAVSCIAPGAFASDMNKVARDHADAVAKMIPAGRIGEAEDMAGAAIYLASRAGDYV
MGGAVTVDGGVSFAR

Specific function: Required for the synthesis of the beta-hydroxy acid moiety of rhamnolipids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=6e-26,
Organism=Homo sapiens, GI19923817, Length=262, Percent_Identity=28.2442748091603, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI5031737, Length=250, Percent_Identity=33.2, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI15277342, Length=270, Percent_Identity=30.7407407407407, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=28.6821705426357, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI33667109, Length=202, Percent_Identity=34.1584158415842, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=26.2295081967213, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=28.2258064516129, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI126723191, Length=189, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=25.6, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI59889578, Length=236, Percent_Identity=28.8135593220339, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI66933014, Length=254, Percent_Identity=25.5905511811024, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI109715829, Length=240, Percent_Identity=27.9166666666667, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI4758504, Length=260, Percent_Identity=26.1538461538462, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI10190746, Length=219, Percent_Identity=25.1141552511416, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1790717, Length=260, Percent_Identity=36.1538461538462, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1789208, Length=256, Percent_Identity=37.5, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=32.6612903225806, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87082160, Length=253, Percent_Identity=33.201581027668, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=29.5719844357977, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=31.5789473684211, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=30.3149606299213, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=25.8196721311475, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=25.8964143426295, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=25.1937984496124, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=24.5136186770428, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=27.3809523809524, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=32.520325203252, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=33.0645161290323, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17561402, Length=263, Percent_Identity=30.7984790874525, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17562906, Length=271, Percent_Identity=29.8892988929889, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=31.3207547169811, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=31.496062992126, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI193204405, Length=272, Percent_Identity=29.0441176470588, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=32.0754716981132, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17531453, Length=273, Percent_Identity=30.03663003663, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17562908, Length=274, Percent_Identity=28.8321167883212, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=29.1666666666667, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=28.3582089552239, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17565030, Length=270, Percent_Identity=30, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=28.030303030303, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=257, Percent_Identity=27.6264591439689, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=272, Percent_Identity=30.1470588235294, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=27.9245283018868, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71997099, Length=248, Percent_Identity=31.0483870967742, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=24.6268656716418, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=28.6245353159851, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=267, Percent_Identity=27.7153558052434, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=271, Percent_Identity=27.6752767527675, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=23.9043824701195, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=28.1368821292776, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=26.6917293233083, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=254, Percent_Identity=30.3149606299213, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17555612, Length=221, Percent_Identity=28.9592760180996, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=25.0980392156863, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=258, Percent_Identity=27.1317829457364, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=262, Percent_Identity=25.1908396946565, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=33.4661354581673, Blast_Score=110, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24643142, Length=260, Percent_Identity=32.3076923076923, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=30.3643724696356, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24644339, Length=261, Percent_Identity=26.4367816091954, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21357041, Length=264, Percent_Identity=25.7575757575758, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=27.5590551181102, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571526, Length=258, Percent_Identity=25.968992248062, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24647946, Length=252, Percent_Identity=25.3968253968254, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI45553409, Length=252, Percent_Identity=25.3968253968254, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24647948, Length=252, Percent_Identity=25.3968253968254, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24644337, Length=194, Percent_Identity=27.8350515463918, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45554248, Length=207, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24640117, Length=207, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28573296, Length=202, Percent_Identity=28.7128712871287, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26728; Mature: 26728

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLFSLEGRVALVTGGSRGIGAMIVKGFLTHGAKRVYITARKAAACDAAAEELSQYGEC
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCE
VSLPGDVSTMEGIQGLAARIKEREPKLDILVNNAGAAWGAGFDEFPESGWDKTVDLNMKT
ECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCCCCCEEEECCCC
PFFLTQALIGELRAAAKDRVAKVINIASIDGQSVTKDETYPYGASKAGLLHMTKRMALRL
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEE
APENIAVSCIAPGAFASDMNKVARDHADAVAKMIPAGRIGEAEDMAGAAIYLASRAGDYV
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCCCEE
MGGAVTVDGGVSFAR
ECCEEEECCCCCCCC
>Mature Secondary Structure
MQNLFSLEGRVALVTGGSRGIGAMIVKGFLTHGAKRVYITARKAAACDAAAEELSQYGEC
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCE
VSLPGDVSTMEGIQGLAARIKEREPKLDILVNNAGAAWGAGFDEFPESGWDKTVDLNMKT
ECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCCCCCEEEECCCC
PFFLTQALIGELRAAAKDRVAKVINIASIDGQSVTKDETYPYGASKAGLLHMTKRMALRL
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEE
APENIAVSCIAPGAFASDMNKVARDHADAVAKMIPAGRIGEAEDMAGAAIYLASRAGDYV
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCCCEE
MGGAVTVDGGVSFAR
ECCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9721281; 10984043 [H]